RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, human

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT3A-208	ENST00000466601	TRBV12-3	P01733	135 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CD33	P20138	364 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	HTR2B	P41595	481 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	BSX	Q3C1V8	233 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	FAM209B	Q5JX69	171 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	WFDC9	Q8NEX5	89 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	OR10C1	Q96KK4	312 aa		11.14	□□□□□ -0.63
DNMT3A-208	ENST00000466601	WNK1	Q9H4A3	2382 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	TRBV7-1	A0A0A6YYK4	115 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	IGHV3-21	A0A0B4J1V1	117 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601		K7EIM0	57 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	SLURP1	P55000	103 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ID3	Q02535	119 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	IAH1	Q2TAA2	248 aa	Predicted RBP	11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	PVRIG	Q6DKI7	326 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	C11orf87	Q6NUJ2	197 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	SLC24A4	Q8NFF2	622 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	OR4D5	Q8NGN0	318 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	SCARB1	Q8WTV0	552 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CCDC140	Q96MF4	163 aa		11.13	□□□□□ -0.63
DNMT3A-208	ENST00000466601	C5orf51	A6NDU8	294 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	FAM25E	A8MYX2	175 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601		I3L2K1	104 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CORT	O00230	105 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	SYNGR2	O43760	224 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	MT-CO2	P00403	227 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ZP3	P21754	424 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	NKX2-1	P43699	371 aa	Predicted RBP	11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	C2orf83	Q53S99	150 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CLEC19A	Q6UXS0	136 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ZNF502	Q8TBZ5	544 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	DCUN1D4	Q92564	292 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	DLX4	Q92988	240 aa	Predicted RBP	11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	PINX1	Q96BK5	328 aa	Known RBP	11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	MAGT1	Q9H0U3	335 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	C21orf62	Q9NYP8	219 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	GSKIP	Q9P0R6	139 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601		U3KQ87	197 aa		11.12	□□□□□ -0.63
DNMT3A-208	ENST00000466601	BMPR1B	O00238	502 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	IFNA10	P01566	189 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CLEC3B	P05452	202 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	IAPP	P10997	89 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	NPY1R	P25929	384 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	HOXD3	P31249	432 aa	Predicted RBP	11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	RGS21	Q2M5E4	152 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	RPEL1	Q2QD12	228 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	GSG1L	Q6UXU4	331 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	NOXA1	Q86UR1	476 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	C2orf50	Q96LR7	162 aa		11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CIB3	Q96Q77	187 aa	Predicted RBP	11.11	□□□□□ -0.63
DNMT3A-208	ENST00000466601	NBEAL1	Q6ZS30	2694 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	PPP5D1	E7EU14	171 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	WRB	O00258	174 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	OVOL1	O14753	267 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	GGCT	O75223	188 aa	Known RBP	11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	SCGB1D2	O95969	90 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ARL3	P36405	182 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	MFAP4	P55083	255 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	POLR2G	P62487	172 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	TATDN3	Q17R31	274 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	TMEM170A	Q8WVE7	144 aa		11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	RCC1L	Q96I51	464 aa	Known RBP	11.1	□□□□□ -0.63
DNMT3A-208	ENST00000466601	LY86	O95711	162 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	IGHV3-48	P01763	117 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	IGLL1	P15814	213 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	GPR183	P32249	361 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	OPRK1	P41145	380 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ATP5I	P56385	69 aa	Predicted RBP	11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	KLF5	Q13887	457 aa	Predicted RBP	11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	MLANA	Q16655	118 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601		Q56UQ5	140 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	UBAC2	Q8NBM4	344 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ATP6V0B	Q99437	205 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	TXN2	Q99757	166 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	MCRIP2	Q9BUT9	160 aa	Known RBP	11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	ZC4H2	Q9NQZ6	224 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	CMYA5	Q8N3K9	4069 aa		11.09	□□□□□ -0.63
DNMT3A-208	ENST00000466601	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	C7orf66	A4D0T2	115 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	OR2T8	A6NH00	312 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601		F8W735	103 aa	Predicted RBP	11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	GOSR2	O14653	212 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	SSNA1	O43805	119 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	OR2C1	O95371	312 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	MBP	P02686	304 aa	Predicted RBP	11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	RPP30	P78346	268 aa	Known RBP	11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	ACSM6	Q6P461	480 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	BSCL2	Q96G97	398 aa	Predicted RBP	11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	GAR1	Q9NY12	217 aa	Known RBP	11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	ALG5	Q9Y673	324 aa		11.08	□□□□□ -0.64
DNMT3A-208	ENST00000466601	VWF	P04275	2813 aa		11.07	□□□□□ -0.64
DNMT3A-208	ENST00000466601	C15orf62	A8K5M9	175 aa		11.07	□□□□□ -0.64
DNMT3A-208	ENST00000466601	TGOLN2	O43493	480 aa		11.07	□□□□□ -0.64
DNMT3A-208	ENST00000466601	SSSCA1	O60232	199 aa		11.07	□□□□□ -0.64
DNMT3A-208	ENST00000466601	SIX6	O95475	246 aa		11.07	□□□□□ -0.64
DNMT3A-208	ENST00000466601	IFNA4	P05014	189 aa		11.07	□□□□□ -0.64
DNMT3A-208	ENST00000466601	FCGR2B	P31994	310 aa	Predicted RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms