RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 GGCTO75223 188 aaKnown RBP9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 TCRBP04435 133 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 OR4E1P0C645 316 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 UBE2MP61081 183 aaKnown RBP9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 DHRS2Q13268 280 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 ACSM6Q6P461 480 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 PLET1Q6UQ28 207 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 OR52B4Q8NGK2 314 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 OR1L6Q8NGR2 347 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 NUDT15Q9NV35 164 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 C21orf62Q9NYP8 219 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 TBC1D24Q9ULP9 559 aa9.21□□□□□ -0.94
SHROOM3-202ENST00000466541 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 WI2-2373I1.2A0A1W2PRP0 233 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 K7EIM0 57 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 UPK1BO75841 260 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 MT-CO2P00403 227 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 NMSQ5H8A3 153 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 DEFB121Q5J5C9 76 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 LYG2Q86SG7 212 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 UXS1Q8NBZ7 420 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 OR9G4Q8NGQ1 327 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 COQ8AQ8NI60 647 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 MRAPQ8TCY5 172 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 VN1R17PQ8TDU5 208 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 PRR25Q96S07 402 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 RBKSQ9H477 322 aa9.2□□□□□ -0.94
SHROOM3-202ENST00000466541 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 A0A1B0GU03 582 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 DUXBA0A1W2PPF3 345 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 ADAP1O75689 374 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 H2AFB2P0C5Z0 115 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 EDN2P20800 178 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 IFITM3Q01628 133 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 TNFRSF9Q07011 255 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 EGFEM1PQ0D2K5 195 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 KLK9Q2XQG4 91 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 FAM106AQ4KMX7 169 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 GGNBP1Q5YKI7 109 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 ZNF114Q8NC26 417 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 OR52E5Q8NH55 327 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 ENKURQ8TC29 256 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 MAGT1Q9H0U3 335 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 HIPK2Q9H2X6 1198 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 PEMTQ9UBM1 199 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 KLK9Q9UKQ9 250 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 PAIP2BQ9ULR5 123 aaKnown RBP9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 TGP01266 2768 aa9.19□□□□□ -0.94
SHROOM3-202ENST00000466541 I3L2K1 104 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 TGOLN2O43493 480 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 WIPF1O43516 503 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 IFNA10P01566 189 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 IFNA21P01568 189 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 CSN3P07498 182 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 IAPPP10997 89 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 OPRK1P41145 380 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 HTR2BP41595 481 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 INSL3P51460 131 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 MFAP4P55083 255 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 ASAH1Q13510 395 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 MLANAQ16655 118 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 PDLIM3Q53GG5 364 aaPredicted RBP9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 LRTM2Q8N967 370 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 DTD1Q8TEA8 209 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 SORL1Q92673 2214 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 SEC22CQ9BRL7 303 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 CHRDL1Q9BU40 450 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 TMED3Q9Y3Q3 217 aa9.18□□□□□ -0.94
SHROOM3-202ENST00000466541 ZNF207O43670 478 aaKnown RBP9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 GNG7O60262 68 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 YIF1AO95070 293 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 SPNP16150 400 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 AARDQ4LEZ3 155 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 UNQ9165/PRO28630Q6UXU0 137 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 IL34Q6ZMJ4 242 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 REC114Q7Z4M0 266 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 GPHB5Q86YW7 130 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 SLC24A4Q8NFF2 622 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 DYNLRB2Q8TF09 96 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 CACNG8Q8WXS5 425 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 BSCL2Q96G97 398 aaPredicted RBP9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 C20orf24Q9BUV8 137 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 GSKIPQ9P0R6 139 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 HSPB7Q9UBY9 170 aa9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 ZMAT5Q9UDW3 170 aaKnown RBP9.17□□□□□ -0.94
SHROOM3-202ENST00000466541 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 FAM25EA8MYX2 175 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 INS-IGF2F8WCM5 200 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 K7EIL1 84 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 NUPL2O15504 423 aaKnown RBP9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 SCGB1D2O95969 90 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 FOLR2P14207 255 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 NPY1RP25929 384 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 CACFD1Q9UGQ2 172 aa9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 ZNF256Q9Y2P7 627 aaPredicted RBP9.16□□□□□ -0.94
SHROOM3-202ENST00000466541 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms