RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NPIPB5A8MRT5 1133 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 H3BUA1 57 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 GABARAPH6UMI1 98 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 J3KRW8 73 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 OVOL1O14753 267 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 SAP30O75446 220 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 BRI3O95415 125 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 DUS4LO95620 317 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 HRASP01112 189 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 IGKV1-5P01602 117 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 HSPB1P04792 205 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 CRYGCP07315 174 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 OR8U8P0C7N1 319 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 P0C879 139 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 NQO2P16083 231 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 SPNP16150 400 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 CTRB1P17538 263 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 HLA-GP17693 338 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 PSMB6P28072 239 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 S100A5P33763 92 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 KIR2DS2P43631 304 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 SYNJ2BPP57105 145 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 TAS2R31P59538 309 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 TSPAN5P62079 268 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 VAMP2P63027 116 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 MRPS10P82664 201 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 EXOSC2Q13868 293 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 KLF5Q13887 457 aaPredicted RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 IL18Q14116 193 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 ZNF79Q15937 498 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 C15orf32Q32M92 178 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 SP6Q3SY56 376 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 SPINK9Q5DT21 86 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 RNASE10Q5GAN6 216 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 CTRB2Q6GPI1 263 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 PYHIN1Q6K0P9 492 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 TMEM229BQ8NBD8 167 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 DMBX1Q8NFW5 382 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 OR13C8Q8NGS7 320 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 MCFD2Q8NI22 146 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 LHFPL5Q8TAF8 219 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 RTBDNQ9BSG5 229 aaPredicted RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 SLA2Q9H6Q3 261 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 PLEKHA2Q9HB19 425 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 HRASLSQ9HDD0 168 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 ZC4H2Q9NQZ6 224 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 NDUFA4L2Q9NRX3 87 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 MDFICQ9P1T7 246 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 LSM4Q9Y4Z0 139 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 LYSTQ99698 3801 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 IGLV11-55A0A075B6I3 123 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 A0A0B4J293 547 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 IGHV3-35A0A0C4DH35 117 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 ANKRD20A5PA0PJZ0 165 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 CXorf65A6NEN9 183 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 C15orf61A6NNL5 157 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 CTDSPLO15194 276 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 GSTZ1O43708 216 aaPredicted RBP3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 TPPPO94811 219 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 OR2C1O95371 312 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 RAB3DO95716 219 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SERPINE2P07093 398 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 CSN3P07498 182 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 PGAM2P15259 253 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 MAS1LP35410 378 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 PIGPP57054 158 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 RND3P61587 244 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 ATP5G2Q06055 141 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 CATR1Q13166 79 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 KLK9Q2XQG4 91 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SCGB2B2Q4G0G5 96 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 DEFB121Q5J5C9 76 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SPANXN2Q5MJ10 180 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 STEAP1BQ6NZ63 245 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 CCDC190Q86UF4 302 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SLC38A6Q8IZM9 456 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 ZBTB8BQ8NAP8 495 aaPredicted RBP3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 OR51S1Q8NGJ8 323 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 TERB2Q8NHR7 220 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 CACNG8Q8WXS5 425 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 TMEM230Q96A57 120 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 TMEM68Q96MH6 324 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SDHCQ99643 169 aaPredicted RBP3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SPIN2AQ99865 258 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 SPIN2BQ9BPZ2 258 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 MCRIP2Q9BUT9 160 aaKnown RBP3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 C5orf66Q9H5L9 145 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 TMEM14BQ9NUH8 114 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 COMMD9Q9P000 198 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 PEF1Q9UBV8 284 aaKnown RBP3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 KLK9Q9UKQ9 250 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 ZNF257Q9Y2Q1 563 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 STARD9Q9P2P6 4700 aa3.62□□□□□ -1.83
EXOSC3-204ENST00000465860 IGHV3OR16-8A0A075B7F1 116 aa3.61□□□□□ -1.83
EXOSC3-204ENST00000465860 GAGE12JA6NER3 117 aa3.61□□□□□ -1.83
EXOSC3-204ENST00000465860 FAM223BA6NKX1 122 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms