RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 OR4C16Q8NGL9 310 aa12.8□□□□□ -0.36
TOM1-213ENST00000465529 OR1L6Q8NGR2 347 aa12.8□□□□□ -0.36
TOM1-213ENST00000465529 LHFPL5Q8TAF8 219 aa12.8□□□□□ -0.36
TOM1-213ENST00000465529 ZFAND1Q8TCF1 268 aa12.8□□□□□ -0.36
TOM1-213ENST00000465529 RAB2BQ8WUD1 216 aa12.8□□□□□ -0.36
TOM1-213ENST00000465529 C15orf40Q8WUR7 153 aa12.8□□□□□ -0.36
TOM1-213ENST00000465529 RTBDNQ9BSG5 229 aaPredicted RBP12.8□□□□□ -0.36
TOM1-213ENST00000465529 CCDC59Q9P031 241 aaKnown RBP12.8□□□□□ -0.36
TOM1-213ENST00000465529 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 OR5AC1P0C628 307 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 MFAP4P55083 255 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 Q6ZRM9 215 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 CCDC71LQ8N9Z2 235 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 C6orf62Q9GZU0 229 aaPredicted RBP12.79□□□□□ -0.36
TOM1-213ENST00000465529 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
TOM1-213ENST00000465529 IGHV3OR16-13A0A075B7E8 117 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 IGHV3-74A0A0B4J1X5 117 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 H3BMQ9 156 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 IFNA17P01571 189 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 ETV6P41212 452 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 TMBIM6P55061 237 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 MRPS10P82664 201 aaKnown RBP12.78□□□□□ -0.36
TOM1-213ENST00000465529 ERHP84090 104 aaKnown RBP12.78□□□□□ -0.36
TOM1-213ENST00000465529 SLIRPQ9GZT3 109 aaKnown RBP12.78□□□□□ -0.36
TOM1-213ENST00000465529 MRPL36Q9P0J6 103 aaKnown RBP12.78□□□□□ -0.36
TOM1-213ENST00000465529 HYDINQ4G0P3 5121 aa12.78□□□□□ -0.36
TOM1-213ENST00000465529 TSPAN4O14817 238 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 NUPL2O15504 423 aaKnown RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 YIF1AO95070 293 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 RNASE2P10153 161 aaKnown RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 HOXA1P49639 335 aaPredicted RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 SSBP1Q04837 148 aaKnown RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 MEF2DQ14814 521 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 ODF3L2Q3SX64 289 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 RNF2Q99496 336 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 SPAG8Q99932 426 aaPredicted RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 GGTLC1Q9BX51 225 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 NAA60Q9H7X0 242 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
TOM1-213ENST00000465529 C14orf166Q9Y224 244 aaKnown RBP12.77□□□□□ -0.37
TOM1-213ENST00000465529 C15orf62A8K5M9 175 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 K7EMT4 169 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 CTDSPLO15194 276 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 GNG7O60262 68 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 AKAIN1P0CW23 69 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 FCGR2BP31994 310 aaPredicted RBP12.76□□□□□ -0.37
TOM1-213ENST00000465529 MLANAQ16655 118 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 ANKRD55Q3KP44 614 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 OR51S1Q8NGJ8 323 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 RNASE11Q8TAA1 199 aaKnown RBP12.76□□□□□ -0.37
TOM1-213ENST00000465529 GLYATL2Q8WU03 294 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 SMPXQ9UHP9 88 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 GPR132Q9UNW8 380 aa12.76□□□□□ -0.37
TOM1-213ENST00000465529 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 LOC102724200A0A096LPH7 203 aaPredicted RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 IGHV7-4-1A0A0J9YVY3 117 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 CHEK1O14757 476 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 SNCAP37840 140 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 RPL5P46777 297 aaKnown RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 RELQ04864 619 aaPredicted RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 SELENOHQ8IZQ5 122 aaKnown RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 TMEM230Q96A57 120 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 RRNAD1Q96FB5 475 aaKnown RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 OR10C1Q96KK4 312 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 TXN2Q99757 166 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 BCL7BQ9BQE9 202 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 PDCD10Q9BUL8 212 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 RHPN1-AS1Q9BWJ2 59 aa12.75□□□□□ -0.37
TOM1-213ENST00000465529 FNDC4Q9H6D8 234 aaPredicted RBP12.75□□□□□ -0.37
TOM1-213ENST00000465529 ANKRD20A5PA0PJZ0 165 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 CRYM-AS1A6NIL9 109 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 INS-IGF2F8WCM5 200 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 ATG12O94817 140 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 NXPH3O95157 252 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 CDS2O95674 445 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
TOM1-213ENST00000465529 TNFSF8P32971 234 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 TFPI2P48307 235 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 ZNF124Q15973 351 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 PVRIGQ6DKI7 326 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 LAMTOR1Q6IAA8 161 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 TMEM116Q8NCL8 245 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 GPR146Q96CH1 333 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
TOM1-213ENST00000465529 PLECQ15149 4684 aaKnown RBP12.74□□□□□ -0.37
TOM1-213ENST00000465529 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
TOM1-213ENST00000465529 GSTZ1O43708 216 aaPredicted RBP12.73□□□□□ -0.37
TOM1-213ENST00000465529 NOL3O60936 208 aaKnown RBP12.73□□□□□ -0.37
TOM1-213ENST00000465529 TMEM268Q5VZI3 342 aa12.73□□□□□ -0.37
TOM1-213ENST00000465529 LILRB2Q8N423 598 aa12.73□□□□□ -0.37
TOM1-213ENST00000465529 RBPMSQ93062 196 aaKnown RBP12.73□□□□□ -0.37
TOM1-213ENST00000465529 SOSTQ9BQB4 213 aa12.73□□□□□ -0.37
TOM1-213ENST00000465529 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms