RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 GPR61Q9BZJ8 451 aa13.07□□□□□ -0.32
USP39-211ENST00000465282 IGHV4OR15-8A0A075B7B6 117 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 A0A087WW49 117 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 ANKRD34BA5PLL1 514 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 ADAP1O75689 374 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 MFAP2P55001 183 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 SEC22CQ9BRL7 303 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 GAR1Q9NY12 217 aaKnown RBP13.06□□□□□ -0.32
USP39-211ENST00000465282 U3KQ87 197 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 NBEAL1Q6ZS30 2694 aa13.06□□□□□ -0.32
USP39-211ENST00000465282 RNASE2P10153 161 aaKnown RBP13.05□□□□□ -0.32
USP39-211ENST00000465282 DEFA5Q01523 94 aa13.05□□□□□ -0.32
USP39-211ENST00000465282 DCTN2Q13561 401 aaKnown RBP13.05□□□□□ -0.32
USP39-211ENST00000465282 TATDN3Q17R31 274 aa13.05□□□□□ -0.32
USP39-211ENST00000465282 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
USP39-211ENST00000465282 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
USP39-211ENST00000465282 RBKSQ9H477 322 aa13.05□□□□□ -0.32
USP39-211ENST00000465282 MFSD2BA6NFX1 497 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
USP39-211ENST00000465282 C2orf83Q53S99 150 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 SLC24A4Q8NFF2 622 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 SCARB1Q8WTV0 552 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 MISP3Q96FF7 219 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 TXN2Q99757 166 aa13.04□□□□□ -0.32
USP39-211ENST00000465282 I3L2K1 104 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 K7EIM0 57 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 SYNGR2O43760 224 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 GGCTO75223 188 aaKnown RBP13.03□□□□□ -0.32
USP39-211ENST00000465282 HOXD3P31249 432 aaPredicted RBP13.03□□□□□ -0.32
USP39-211ENST00000465282 ID3Q02535 119 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 IAH1Q2TAA2 248 aaPredicted RBP13.03□□□□□ -0.32
USP39-211ENST00000465282 CLEC19AQ6UXS0 136 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 UXS1Q8NBZ7 420 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
USP39-211ENST00000465282 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 C21orf62Q9NYP8 219 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 NOTCH3Q9UM47 2321 aa13.03□□□□□ -0.32
USP39-211ENST00000465282 BMPR1BO00238 502 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 OVOL1O14753 267 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 NXPH3O95157 252 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 MT-CO2P00403 227 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 TRBV12-3P01733 135 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 CLEC3BP05452 202 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 NPY1RP25929 384 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
USP39-211ENST00000465282 SLURP1P55000 103 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 MFAP4P55083 255 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 RPP30P78346 268 aaKnown RBP13.02□□□□□ -0.33
USP39-211ENST00000465282 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
USP39-211ENST00000465282 SPSB3Q6PJ21 355 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 OR4D5Q8NGN0 318 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 DCUN1D4Q92564 292 aa13.02□□□□□ -0.33
USP39-211ENST00000465282 BSCL2Q96G97 398 aaPredicted RBP13.02□□□□□ -0.33
USP39-211ENST00000465282 RPS10-NUDT3A0A1W2PQS6 291 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 IFNA10P01566 189 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 ARL3P36405 182 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 INSL3P51460 131 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 GPHB5Q86YW7 130 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 ZBTB8BQ8NAP8 495 aaPredicted RBP13.01□□□□□ -0.33
USP39-211ENST00000465282 DLX4Q92988 240 aaPredicted RBP13.01□□□□□ -0.33
USP39-211ENST00000465282 PINX1Q96BK5 328 aaKnown RBP13.01□□□□□ -0.33
USP39-211ENST00000465282 OR10C1Q96KK4 312 aa13.01□□□□□ -0.33
USP39-211ENST00000465282 C5orf51A6NDU8 294 aa13□□□□□ -0.33
USP39-211ENST00000465282 WRBO00258 174 aa13□□□□□ -0.33
USP39-211ENST00000465282 IGHV3-23P01764 117 aa13□□□□□ -0.33
USP39-211ENST00000465282 NPBWR1P48145 328 aa13□□□□□ -0.33
USP39-211ENST00000465282 RGS21Q2M5E4 152 aa13□□□□□ -0.33
USP39-211ENST00000465282 C9orf66Q5T8R8 295 aa13□□□□□ -0.33
USP39-211ENST00000465282 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
USP39-211ENST00000465282 GSG1LQ6UXU4 331 aa13□□□□□ -0.33
USP39-211ENST00000465282 C1QL4Q86Z23 238 aa13□□□□□ -0.33
USP39-211ENST00000465282 C2orf50Q96LR7 162 aa13□□□□□ -0.33
USP39-211ENST00000465282 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
USP39-211ENST00000465282 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
USP39-211ENST00000465282 S4R3C0 116 aa13□□□□□ -0.33
USP39-211ENST00000465282 PPP5D1E7EU14 171 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 TGOLN2O43493 480 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 WIPF1O43516 503 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 SLC25A4P12235 298 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 IGLL1P15814 213 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 GPR183P32249 361 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 OPRK1P41145 380 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 RAB11AP62491 216 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 GSKIPQ9P0R6 139 aa12.99□□□□□ -0.33
USP39-211ENST00000465282 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 FAM25EA8MYX2 175 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 SEC14L6B5MCN3 397 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 LGALS9O00182 355 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 NUPL2O15504 423 aaKnown RBP12.98□□□□□ -0.33
USP39-211ENST00000465282 SCGB2A1O75556 95 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 SPNP16150 400 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 Q56UQ5 140 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 ACSM6Q6P461 480 aa12.98□□□□□ -0.33
USP39-211ENST00000465282 RAB40CQ96S21 281 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms