RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 NXPH3O95157 252 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 H2AFB2P0C5Z0 115 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 SLC25A6P12236 298 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 ARL3P36405 182 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 ACSM6Q6P461 480 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 MISP3Q96FF7 219 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 NUDT15Q9NV35 164 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
SQSTM1-205ENST00000464493 K7EIM0 57 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 WIPF1O43516 503 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 PITX3O75364 302 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 OR2C1O95371 312 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 INSL3P51460 131 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 TNFRSF9Q07011 255 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 GGNBP1Q5YKI7 109 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 ELOVL1Q9BW60 279 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 C21orf62Q9NYP8 219 aa11.11□□□□□ -0.63
SQSTM1-205ENST00000464493 I3L2K1 104 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 SAP30O75446 220 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 MT-CO2P00403 227 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 GPR183P32249 361 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 HTR2BP41595 481 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 EGFEM1PQ0D2K5 195 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 BSXQ3C1V8 233 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 OR52B4Q8NGK2 314 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 OR9G4Q8NGQ1 327 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 OR4C12Q96R67 309 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 RBKSQ9H477 322 aa11.1□□□□□ -0.63
SQSTM1-205ENST00000464493 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 CORTO00230 105 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 ADAP1O75689 374 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 IFNA21P01568 189 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 DEFA1P59665 94 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 DEFA3P59666 94 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 Q56UQ5 140 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 DUSP18Q8NEJ0 188 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 BSCL2Q96G97 398 aaPredicted RBP11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 ZC4H2Q9NQZ6 224 aa11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 ZMAT5Q9UDW3 170 aaKnown RBP11.09□□□□□ -0.63
SQSTM1-205ENST00000464493 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 F8W735 103 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 TGOLN2O43493 480 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 MFAP4P55083 255 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 FAM106AQ4KMX7 169 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 SPSB3Q6PJ21 355 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 NRARPQ7Z6K4 114 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 TXN2Q99757 166 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 SEC22CQ9BRL7 303 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 PEMTQ9UBM1 199 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 U3KQ87 197 aa11.08□□□□□ -0.64
SQSTM1-205ENST00000464493 DNAH3Q8TD57 4116 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 LGALS9O00182 355 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 MED6O75586 246 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 IFNA10P01566 189 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 FCGR2BP31994 310 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 C11orf87Q6NUJ2 197 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 REC114Q7Z4M0 266 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
SQSTM1-205ENST00000464493 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 IL5P05113 134 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 CSN3P07498 182 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 CTSGP08311 255 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 NPY1RP25929 384 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 OPRK1P41145 380 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 C12orf45Q8N5I9 185 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 UXS1Q8NBZ7 420 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 CHRDL1Q9BU40 450 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 AURKAIP1Q9NWT8 199 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 SIGLEC8Q9NYZ4 499 aa11.06□□□□□ -0.64
SQSTM1-205ENST00000464493 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 NUPL2O15504 423 aaKnown RBP11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 SYNGR2O43760 224 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 ADMP35318 185 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 NPBWR1P48145 328 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms