RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
CDC42BPA-210ENST00000462553 DNAH2Q9P225 4427 aa5.96□□□□□ -1.45
CDC42BPA-210ENST00000462553 TEX13DA0A0J9YY54 714 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 RBMY1BA6NDE4 496 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 RBMY1EA6NEQ0 496 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 K7EIM0 57 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 ST8SIA3O43173 380 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 B3GALNT1O75752 331 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 CDS2O95674 445 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 DHFRP00374 187 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 HLA-AP01891 365 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 RBMY1DP0C7P1 496 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 HIST1H1BP16401 226 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 AKR1C2P52895 323 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM187Q14656 261 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 BAK1Q16611 211 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 RPEL1Q2QD12 228 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 AARDQ4LEZ3 155 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 SPINK9Q5DT21 86 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 LCN12Q6JVE5 192 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 Q6ZRM9 215 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 HSD17B13Q7Z5P4 300 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 SELENOHQ8IZQ5 122 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR2C3Q8N628 320 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 ZNF114Q8NC26 417 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR4A16Q8NH70 328 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 EEF1AKMT3Q96AZ1 226 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 GALNT14Q96FL9 552 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 HINT2Q9BX68 163 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 MCUBQ9NWR8 336 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 FKBP11Q9NYL4 201 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 NDUFA13Q9P0J0 144 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 SCP2D1Q9UJQ7 156 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 DNAH17Q9UFH2 4485 aa5.96□□□□□ -1.46
CDC42BPA-210ENST00000462553 IGHV3-21A0A0B4J1V1 117 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 INS-IGF2F8WCM5 200 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 CD7P09564 240 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 DEFA4P12838 97 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 CD81P60033 236 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 HSPE1P61604 102 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 TRIM16LQ309B1 348 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 FAM209BQ5JX69 171 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 SPANXN2Q5MJ10 180 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 PVRIGQ6DKI7 326 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 CLEC19AQ6UXS0 136 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 GTSCR1Q86UQ5 136 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 TOMM5Q8N4H5 51 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 DEDD2Q8WXF8 326 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 RBPMSQ93062 196 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM56Q96MV1 263 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 TUBA4BQ9H853 241 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM56-RWDD3S4R434 201 aa5.95□□□□□ -1.46
CDC42BPA-210ENST00000462553 TRBV7-1A0A0A6YYK4 115 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM213A2RRL7 107 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 A6NHS1 94 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 C2orf70A6NJV1 201 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 ZNF785A8K8V0 405 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 A8MWP6 167 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 I3L2K1 104 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 GGCTO75223 188 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR2C1O95371 312 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 GPR183P32249 361 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 BTCP35070 178 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 FAUP35544 74 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 ARL3P36405 182 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 AP3S2P59780 193 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 DHODHQ02127 395 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 BSXQ3C1V8 233 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 CD300EQ496F6 205 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 NMSQ5H8A3 153 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM268Q5VZI3 342 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 SLC25A24Q6NUK1 477 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 UNQ9165/PRO28630Q6UXU0 137 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 GPHB5Q86YW7 130 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 DEFB125Q8N687 156 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 SLC35G3Q8N808 338 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR2K2Q8NGT1 345 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR1P1Q8NH06 330 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 VN1R17PQ8TDU5 208 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 IL22RA2Q969J5 263 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 GPR146Q96CH1 333 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 CXorf58Q96LI9 332 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 NEURL2Q9BR09 285 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 ZNF436Q9C0F3 470 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 ZC4H2Q9NQZ6 224 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 CACNG5Q9UF02 275 aa5.94□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR2T8A6NH00 312 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 LGALS9O00182 355 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 TGOLN2O43493 480 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 ATG12O94817 140 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 CLEC3BP05452 202 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 RNASE2P10153 161 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 IL7P13232 177 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 AKR1C4P17516 323 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 FCGR2BP31994 310 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 ADMP35318 185 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 CCR6P51684 374 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 ANKRD55Q3KP44 614 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 ZNF57Q68EA5 555 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms