RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 MYCNOSP40205 109 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 CCR6P51684 374 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 ERVK-16P61578 105 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 HSPE1P61604 102 aaKnown RBP4.4□□□□□ -1.71
VPS36-202ENST00000462289 IL15RAQ13261 267 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 DHRS2Q13268 280 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 PLGLAQ15195 96 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 TNXAQ16473 311 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 SP6Q3SY56 376 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 C9orf152Q5JTZ5 239 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 FAM209BQ5JX69 171 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 TRIQKQ629K1 86 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 UNQ5815/PRO19632Q6UWF5 114 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 SSX9Q7RTT3 188 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 FAM223AQ8IWN6 122 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 SGPP2Q8IWX5 399 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 CENPSQ8N2Z9 138 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 OR2C3Q8N628 320 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 SLC35G3Q8N808 338 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 NECAP1Q8NC96 275 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 OR4F17Q8NGA8 305 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 OR1P1Q8NH06 330 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 GRPEL2Q8TAA5 225 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 MITD1Q8WV92 249 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 USMG5Q96IX5 58 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 OR4F4Q96R69 305 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 MARVELD1Q9BSK0 173 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 GNB4Q9HAV0 340 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 PALMDQ9NP74 551 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 MCUBQ9NWR8 336 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 HSPB7Q9UBY9 170 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 CACFD1Q9UGQ2 172 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 F11RQ9Y624 299 aaKnown RBP4.4□□□□□ -1.71
VPS36-202ENST00000462289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.39□□□□□ -1.71
VPS36-202ENST00000462289 A0A0G2JLM5 398 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 A0A1B0GU03 582 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 C9orf170A2RU37 121 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 HMX3A6NHT5 357 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 FAM90A26D6RGX4 464 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 K7EIM0 57 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 ST8SIA3O43173 380 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 ATG12O94817 140 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 CNIH1O95406 144 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 IL5P05113 134 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 OR4E1P0C645 316 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 TRAPPC2P0DI81 140 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 TRAPPC2BP0DI82 140 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 HIST1H1BP16401 226 aaKnown RBP4.39□□□□□ -1.71
VPS36-202ENST00000462289 SPCS3P61009 180 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 GNB1P62873 340 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 EGFEM1PQ0D2K5 195 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 ECSCRQ19T08 205 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 IZUMO4Q1ZYL8 232 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 ZNF57Q68EA5 555 aaPredicted RBP4.39□□□□□ -1.71
VPS36-202ENST00000462289 HIST2H2BDQ6DRA6 164 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 H2BFWTQ7Z2G1 175 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 C11orf44Q8N8P7 122 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 DMBX1Q8NFW5 382 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 OR10W1Q8NGF6 305 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 CHAC2Q8WUX2 184 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 TMEM170AQ8WVE7 144 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 GPR146Q96CH1 333 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 CLCC1Q96S66 551 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 COMMD5Q9GZQ3 224 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 C20orf85Q9H1P6 137 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 SIGLEC8Q9NYZ4 499 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 FLVCR2Q9UPI3 526 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 KCNIP3Q9Y2W7 256 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 OR51B2Q9Y5P1 312 aa4.39□□□□□ -1.71
VPS36-202ENST00000462289 COL7A1Q02388 2944 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 CENPXA8MT69 81 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 PRSS46E5RG02 174 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 I3L2K1 104 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 CCL24O00175 119 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 SNAPC5O75971 98 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 ACTL6BO94805 426 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 RNASE2P10153 161 aaKnown RBP4.38□□□□□ -1.71
VPS36-202ENST00000462289 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
VPS36-202ENST00000462289 RHOGP84095 191 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 KLF5Q13887 457 aaPredicted RBP4.38□□□□□ -1.71
VPS36-202ENST00000462289 TMEM268Q5VZI3 342 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 IL34Q6ZMJ4 242 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 C19orf35Q6ZS72 473 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 LYZL2Q7Z4W2 148 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 LGI3Q8N145 548 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 KLHL30-AS1Q8NEE0 82 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 OR5T1Q8NG75 326 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 ZNF502Q8TBZ5 544 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 VN1R17PQ8TDU5 208 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 C11orf1Q9H5F2 150 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.38□□□□□ -1.71
VPS36-202ENST00000462289 NUDT15Q9NV35 164 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 CACNG5Q9UF02 275 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 NSG2Q9Y328 171 aa4.38□□□□□ -1.71
VPS36-202ENST00000462289 TMED3Q9Y3Q3 217 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms