RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GNG5P63218 68 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 TGIF1Q15583 401 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 Q5BKY6 102 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 SLC25A45Q8N413 288 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 DNAJC30Q96LL9 226 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 ZNF646O15015 1829 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-205ENST00000461221 IQCF6A8MYZ5 107 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 ZP1P60852 638 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 ZNF415Q09FC8 603 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 C1QTNF5Q9BXJ0 243 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 RNASE7Q9H1E1 156 aaKnown RBP7.54□□□□□ -1.2
BRCA1-205ENST00000461221 IGHV2OR16-5A0A0B4J2B6 119 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 A8MXK9 166 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 YPEL1O60688 119 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 LAGE3Q14657 143 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 TMEM155Q4W5P6 130 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 CTHRC1Q96CG8 243 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 YPEL2Q96QA6 119 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 BSPH1Q075Z2 132 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 GLMPQ8WWB7 406 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 RTBDNQ9BSG5 229 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-205ENST00000461221 EDA2RQ9HAV5 297 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 SP9P0CG40 484 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 RIPPLY3P57055 190 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
BRCA1-205ENST00000461221 FAM166AQ6J272 317 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 A0A087WX48 190 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 C8orf46Q8TAG6 207 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 TSKUQ8WUA8 353 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 C18orf12Q96KH6 178 aa7.53□□□□□ -1.2
BRCA1-205ENST00000461221 C17orf100A8MU93 164 aa7.52□□□□□ -1.2
BRCA1-205ENST00000461221 PAX4O43316 350 aa7.52□□□□□ -1.2
BRCA1-205ENST00000461221 LOC101059948A0A1B0GTJ6 334 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 CD5P06127 495 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 RHOGP84095 191 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 SPRED2Q7Z698 418 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 CITED2Q99967 270 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-205ENST00000461221 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 SAA2-SAA4A0A096LPE2 208 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 SAA2P0DJI9 122 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-205ENST00000461221 CCL1P22362 96 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 GATA2P23769 480 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-205ENST00000461221 FAM27E3Q08E93 113 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 CD300EQ496F6 205 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-205ENST00000461221 PPP1R32Q7Z5V6 425 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 ZNF48Q96MX3 618 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-205ENST00000461221 LINC00271P0C7V0 271 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 ECM29Q5VYK3 1845 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 TRBV6-7A0A0A0MS04 114 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 RAMP1O60894 148 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 OR9G9P0C7N8 305 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 C19orf48Q6RUI8 117 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 SIGLEC15Q6ZMC9 328 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 NR2C2APQ86WQ0 139 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 TMEM133Q9H2Q1 129 aa7.52□□□□□ -1.21
BRCA1-205ENST00000461221 A0A0G2JK05 382 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 ITGB1BP1O14713 200 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 C1QCP02747 245 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 EVI2AP22794 236 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 ATP1A1-AS1Q5TC04 95 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 ABCA3Q99758 1704 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 PLPPR1Q8TBJ4 325 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 SPSB2Q99619 263 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 METRNQ9UJH8 293 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 C1QTNF9P0C862 333 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
BRCA1-205ENST00000461221 C1QL2Q7Z5L3 287 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 FDCSPQ8NFU4 85 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
BRCA1-205ENST00000461221 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 NINQ8N4C6 2090 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 LILRA1O75019 489 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 PAX8Q06710 450 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 C2orf82Q6UX34 121 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 TNFRSF14Q92956 283 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 REPIN1Q9BWE0 567 aaKnown RBP7.51□□□□□ -1.21
BRCA1-205ENST00000461221 LRP5O75197 1615 aa7.51□□□□□ -1.21
BRCA1-205ENST00000461221 PRCDQ00LT1 54 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 ANAPC10Q9UM13 185 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 MRPS18CQ9Y3D5 142 aaKnown RBP7.5□□□□□ -1.21
BRCA1-205ENST00000461221 SCN7AQ01118 1682 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 LOC102723996A0A087X1L8 192 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 TMEM8BA6NDV4 472 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 WNT2P09544 360 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 SLC25A48Q6ZT89 311 aaKnown RBP7.5□□□□□ -1.21
BRCA1-205ENST00000461221 RNASE6Q93091 150 aaKnown RBP7.5□□□□□ -1.21
BRCA1-205ENST00000461221 WFDC6Q9BQY6 131 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 IGHV3-64A0A075B6Q5 118 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 RNF222A6NCQ9 220 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 LEPROTO15243 131 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 PRTN3P24158 256 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 FAM201AQ5SY85 155 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 RASL11AQ6T310 242 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms