RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 RNF7Q9UBF6 113 aa4□□□□□ -1.77
SF3A3-202ENST00000460925 CTSZQ9UBR2 303 aa4□□□□□ -1.77
SF3A3-202ENST00000460925 ST3GAL6Q9Y274 331 aa4□□□□□ -1.77
SF3A3-202ENST00000460925 NOP16Q9Y3C1 178 aaKnown RBP4□□□□□ -1.77
SF3A3-202ENST00000460925 WIPI2Q9Y4P8 454 aa4□□□□□ -1.77
SF3A3-202ENST00000460925 CCDC168Q8NDH2 2452 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 IGHV4OR15-8A0A075B7B6 117 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 TRAV30A0A087WSZ9 112 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 TRAV39A0A0B4J263 110 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 IGHV4-61A0A0C4DH41 118 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 RNF222A6NCQ9 220 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 MEIS3P1A6NDR6 274 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 E5RGE8 158 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 SOCS1O15524 211 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 OR2H2O95918 312 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 LHBP01229 141 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 PMP2P02689 132 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 C8orf88P0DMB2 117 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 HIST1H1EP10412 219 aaKnown RBP3.99□□□□□ -1.77
SF3A3-202ENST00000460925 PSG2P11465 335 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 CAV2P51636 162 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 DLX1P56177 255 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 ERVFC1-1P60608 527 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 BTG1P62324 171 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 PRB3Q04118 309 aaPredicted RBP3.99□□□□□ -1.77
SF3A3-202ENST00000460925 ATXN7L3Q14CW9 347 aaPredicted RBP3.99□□□□□ -1.77
SF3A3-202ENST00000460925 CLEC12BQ2HXU8 276 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 C10orf91Q5T1B1 145 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 STUMQ69YW2 141 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 PRSS54Q6PEW0 395 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 C6orf201Q7Z4U5 140 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 CBLN2Q8IUK8 224 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 MKXQ8IYA7 352 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 OSR2Q8N2R0 312 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 BPIFB2Q8N4F0 458 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 CD177Q8N6Q3 437 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 TPRX1Q8N7U7 411 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 SAMD12Q8N8I0 201 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 WFDC11Q8NEX6 87 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 MCFD2Q8NI22 146 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 UBALD1Q8TB05 177 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 CASTOR1Q8WTX7 329 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 RDH5Q92781 318 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 PTX4Q96A99 478 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 ISOC2Q96AB3 205 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 RPEQ96AT9 228 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 GALMQ96C23 342 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 GAFA1Q96PS6 74 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 S100A13Q99584 98 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 HDHD3Q9BSH5 251 aaPredicted RBP3.99□□□□□ -1.77
SF3A3-202ENST00000460925 LPAR5Q9H1C0 372 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 HES4Q9HCC6 221 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 ZNF230Q9UIE0 474 aaPredicted RBP3.99□□□□□ -1.77
SF3A3-202ENST00000460925 TNFSF18Q9UNG2 199 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 WDR83OSQ9Y284 106 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 POLDIP2Q9Y2S7 368 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 CUBNO60494 3623 aa3.99□□□□□ -1.77
SF3A3-202ENST00000460925 NAV2Q8IVL1 2488 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 MAP1AP78559 2803 aaPredicted RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 A0A096LNT2 108 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 KBTBD11-OT1A0A1B0GTJ5 212 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 A0A1W2PS18 150 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 TMEM235A6NFC5 223 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CEACAM18A8MTB9 384 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 G3V4G9 280 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 PHF1O43189 567 aaPredicted RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 OR7C1O76099 320 aaPredicted RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 HAND1O96004 215 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CYB5AP00167 134 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CFDP00746 253 aaPredicted RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 OR5H8P0DN80 308 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 GNB3P16520 340 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 ELK1P19419 428 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CDK2P24941 298 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 S100A2P29034 98 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 GPR6P46095 362 aaPredicted RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 NPBWR1P48145 328 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 TMEM50BP56557 158 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 LINC00205P59089 165 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 DEFA1P59665 94 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 DEFA3P59666 94 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 FGF12P61328 243 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 RPS27AP62979 156 aaKnown RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 BAXQ07812 192 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 EDDM3AQ14507 147 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 ZNF404Q494X3 552 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 TMEM128Q5BJH2 165 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 COL5A1-AS1Q5SY13 56 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 TPTE2P1Q5T6R2 138 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 FAM78BQ5VT40 261 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 TEX36Q5VZQ5 186 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 Q6P435 159 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CNIH2Q6PI25 160 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 STHQ8IWL8 128 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 SAXO1Q8IYX7 474 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CMTM1Q8IZ96 169 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 CIARTQ8N365 385 aaPredicted RBP3.98□□□□□ -1.77
SF3A3-202ENST00000460925 OR4S1Q8NGB4 309 aa3.98□□□□□ -1.77
SF3A3-202ENST00000460925 OR11H4Q8NGC9 324 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms