RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PRR19A6NJB7 356 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 PEX7O00628 323 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 GFRA3O60609 400 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 PLNP26678 52 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 TMEM252Q8N6L7 170 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 ZNF385AQ96PM9 386 aaKnown RBP7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 LOC102723996A0A087X1L8 192 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 LILRA1O75019 489 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 TIMM23BQ5SRD1 257 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 A0A1W2PP11 408 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 TMEM54Q969K7 222 aa7.57□□□□□ -1.2
SHROOM4-203ENST00000460112 WDR90Q96KV7 1748 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 PPBPP02775 128 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 CENPWQ5EE01 88 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 PPP1R27Q86WC6 154 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 OR13A1Q8NGR1 328 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 OR5P3Q8WZ94 311 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 RPP21Q9H633 154 aaKnown RBP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 SLC25A15Q9Y619 301 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 GPR146Q96CH1 333 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 NABP2Q9BQ15 211 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 DPM3Q9P2X0 92 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 ZNF106Q9H2Y7 1883 aaKnown RBP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 IGHV3-72A0A0B4J1Y9 119 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 C9JCJ5 164 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 PLAUP00749 431 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 GCHFRP30047 84 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 C1QL3Q5VWW1 255 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 ZNF818PQ6ZRF7 136 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 SMAD7O15105 426 aaKnown RBP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 RNASE4P34096 147 aaKnown RBP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 SRSF7Q16629 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 WDR82Q6UXN9 313 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 TEX45Q8NA69 505 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 MS4A6AQ9H2W1 248 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 GCM2O75603 506 aaPredicted RBP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 TFF2Q03403 129 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 MGAT2Q10469 447 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 A0A0J9YW62 118 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 MORN3Q6PF18 240 aaPredicted RBP7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 OR10W1Q8NGF6 305 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 DLL3Q9NYJ7 618 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 C21orf62Q9NYP8 219 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 ORMDL2Q53FV1 153 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 Q96M66 194 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 CYSLTR1Q9Y271 337 aa7.56□□□□□ -1.2
SHROOM4-203ENST00000460112 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 CXCL2P19875 107 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 A0A1B0GW64 132 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 FBXL7Q9UJT9 491 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 TRAV24A0A0B4J272 114 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 A0A1W2PPV9 198 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 SCTP09683 121 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 COX11Q9Y6N1 276 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 M0R381 172 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 UBE2CO00762 179 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 KLK2P20151 261 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 RUNX1Q01196 453 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 KIAA1671Q9BY89 1806 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 PAX2Q02962 417 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 C5orf30Q96GV9 206 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 ZNF703Q9H7S9 590 aaPredicted RBP7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 DSCAMO60469 2012 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 CRYBB3P26998 211 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 P2RY4P51582 365 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 SEC11AP67812 179 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 ZNF883P0CG24 379 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 EIF4EBP2Q13542 120 aaPredicted RBP7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 C2CD3Q4AC94 2353 aa7.55□□□□□ -1.2
SHROOM4-203ENST00000460112 HOXD3P31249 432 aaPredicted RBP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 GLRXP35754 106 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 UNC119Q13432 240 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TBR1Q16650 682 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 RPP25Q9BUL9 199 aaKnown RBP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 PRSS22Q9GZN4 317 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 C2orf16Q68DN1 1984 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 REG1AP05451 166 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 COX6A1P12074 109 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 ERVK11-1P61568 191 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 GDF15Q99988 308 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TBL2Q9Y4P3 447 aaKnown RBP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TRAV1-1A0A0B4J248 108 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 FOXS1O43638 330 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 NDUFS6O75380 124 aaKnown RBP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 ESDP10768 282 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TRAV8-6A0A0B4J262 113 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms