RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 DCUN1D4Q92564 292 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 WRBO00258 174 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 LYZL2Q7Z4W2 148 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 SLC24A4Q8NFF2 622 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 OR10W1Q8NGF6 305 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 UFC1Q9Y3C8 167 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 E7EUB6 86 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 FABP1P07148 127 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 KLF5Q13887 457 aaPredicted RBP8.25□□□□□ -1.09
UBR4-208ENST00000459947 SNRPGP15A8MWD9 76 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 REG1AP05451 166 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 MYOD1P15172 320 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 ANKRD55Q3KP44 614 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 NUDT15Q9NV35 164 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 ANKRD34BA5PLL1 514 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 PITX3O75364 302 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 RNASE2P10153 161 aaKnown RBP8.24□□□□□ -1.09
UBR4-208ENST00000459947 NPY1RP25929 384 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 DEFB136Q30KP8 78 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 BEAN1Q3B7T3 259 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 BSXQ3C1V8 233 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 GGNBP1Q5YKI7 109 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 C12orf45Q8N5I9 185 aaPredicted RBP8.24□□□□□ -1.09
UBR4-208ENST00000459947 DTD1Q8TEA8 209 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 TECRQ9NZ01 308 aaKnown RBP8.24□□□□□ -1.09
UBR4-208ENST00000459947 TBC1D24Q9ULP9 559 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 TNCP24821 2201 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 NUPL2O15504 423 aaKnown RBP8.24□□□□□ -1.09
UBR4-208ENST00000459947 TGOLN2O43493 480 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 Q56UQ5 140 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 ACSM6Q6P461 480 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 MISP3Q96FF7 219 aa8.24□□□□□ -1.09
UBR4-208ENST00000459947 A0A0G2JRQ6 117 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 EGFEM1PQ0D2K5 195 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 ZFHX3Q15911 3703 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 S100A7P31151 101 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 PLXNB1O43157 2135 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 NDUFA4O00483 81 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 PTTG1O95997 202 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 PRH1P02810 166 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 CD5P06127 495 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 IGLL1P15814 213 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 ANXA7P20073 488 aaKnown RBP8.23□□□□□ -1.09
UBR4-208ENST00000459947 GPX4P36969 197 aaPredicted RBP8.23□□□□□ -1.09
UBR4-208ENST00000459947 CLEC19AQ6UXS0 136 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 OR9G4Q8NGQ1 327 aa8.23□□□□□ -1.09
UBR4-208ENST00000459947 DBX1A6NMT0 343 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 A8MWP6 167 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 BMPR1BO00238 502 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 HOXB5P09067 269 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 NKX2-1P43699 371 aaPredicted RBP8.22□□□□□ -1.09
UBR4-208ENST00000459947 SLURP1P55000 103 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 Q6ZRM9 215 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 CACNG8Q8WXS5 425 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 DLX4Q92988 240 aaPredicted RBP8.22□□□□□ -1.09
UBR4-208ENST00000459947 RAB40CQ96S21 281 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 GINS3Q9BRX5 216 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 RBKSQ9H477 322 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 STAB1Q9NY15 2570 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 FLVCR2Q9UPI3 526 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 I3L2K1 104 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 K7EIM0 57 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 SYNGR2O43760 224 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 GNG7O60262 68 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 MT-CO2P00403 227 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 IFNA10P01566 189 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 NUP62P37198 522 aaPredicted RBP8.22□□□□□ -1.09
UBR4-208ENST00000459947 TAS2R30P59541 319 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 ZNF436Q9C0F3 470 aaPredicted RBP8.22□□□□□ -1.09
UBR4-208ENST00000459947 TRAV6A0A075B6T7 132 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 INMT-MINDY4F8WBC2 141 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 K7EMT4 169 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 PVALBP20472 110 aaPredicted RBP8.22□□□□□ -1.09
UBR4-208ENST00000459947 LCN12Q6JVE5 192 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 GSG1LQ6UXU4 331 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 TMEM231Q9H6L2 316 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 PFDN2Q9UHV9 154 aa8.22□□□□□ -1.09
UBR4-208ENST00000459947 SAP30O75446 220 aa8.21□□□□□ -1.09
UBR4-208ENST00000459947 CYCSP99999 105 aaKnown RBP8.21□□□□□ -1.09
UBR4-208ENST00000459947 OR4X1Q8NH49 305 aa8.21□□□□□ -1.09
UBR4-208ENST00000459947 SCARB1Q8WTV0 552 aa8.21□□□□□ -1.09
UBR4-208ENST00000459947 SLC35E1Q96K37 410 aa8.21□□□□□ -1.09
UBR4-208ENST00000459947 GPR183P32249 361 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 OPRK1P41145 380 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 IZUMO4Q1ZYL8 232 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 ZNF600Q6ZNG1 722 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 DYNLRB2Q8TF09 96 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 NARS2Q96I59 477 aaKnown RBP8.21□□□□□ -1.1
UBR4-208ENST00000459947 TRAV25A0A0B4J276 109 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 MFSD2BA6NFX1 497 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 CLEC3BP05452 202 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 ZBTB8BQ8NAP8 495 aaPredicted RBP8.21□□□□□ -1.1
UBR4-208ENST00000459947 DUX3Q96PT4 197 aa8.21□□□□□ -1.1
UBR4-208ENST00000459947 CFDP00746 253 aaPredicted RBP8.2□□□□□ -1.1
UBR4-208ENST00000459947 IAH1Q2TAA2 248 aaPredicted RBP8.2□□□□□ -1.1
UBR4-208ENST00000459947 MARVELD1Q9BSK0 173 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms