RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 LYPD2Q6UXB3 125 aa16.75■□□□□ 0.27
CRAT-207ENST00000458362 NOL4LQ96MY1 436 aaPredicted RBP16.75■□□□□ 0.27
CRAT-207ENST00000458362 TRAV5A0A0B4J249 113 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 A0A1B0GV90 55 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 CGB1A6NKQ9 187 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 RAB4BP61018 213 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 RPL8P62917 257 aaKnown RBP16.74■□□□□ 0.27
CRAT-207ENST00000458362 TMEM177Q53S58 311 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 PNKDQ8N490 385 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 COMMD5Q9GZQ3 224 aa16.74■□□□□ 0.27
CRAT-207ENST00000458362 IER3P46695 156 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 C10orf55Q5SWW7 151 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 H1FXQ92522 213 aaKnown RBP16.73■□□□□ 0.27
CRAT-207ENST00000458362 SLC25A33Q9BSK2 321 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 RNASE7Q9H1E1 156 aaKnown RBP16.73■□□□□ 0.27
CRAT-207ENST00000458362 PSMB11A5LHX3 300 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 DLL1O00548 723 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 SNRPCP09234 159 aaKnown RBP16.73■□□□□ 0.27
CRAT-207ENST00000458362 IQCJQ1A5X6 159 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 OR8I2Q8N0Y5 310 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 FAM167A-AS1Q96KT0 104 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 ZGRF1Q86YA3 2104 aa16.73■□□□□ 0.27
CRAT-207ENST00000458362 TMEM178BH3BS89 294 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 SCGB1D1O95968 90 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 SUMO1P63165 101 aaKnown RBP16.72■□□□□ 0.27
CRAT-207ENST00000458362 ZNF600Q6ZNG1 722 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 FLYWCH2Q96CP2 140 aaKnown RBP16.72■□□□□ 0.27
CRAT-207ENST00000458362 SLC25A2Q9BXI2 301 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 SMG1Q96Q15 3661 aaKnown RBP16.72■□□□□ 0.27
CRAT-207ENST00000458362 IGLV2-8P01709 118 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 C8orf88P0DMB2 117 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 TAS2R45P59539 299 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 WT1-ASQ06250 92 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 CMTM2Q8TAZ6 248 aa16.72■□□□□ 0.27
CRAT-207ENST00000458362 PPIAL4EA0A075B759 164 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 PPIAL4DF5H284 164 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 PPIAL4FP0DN26 164 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 FXYD3Q14802 87 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 TMEM167AQ8TBQ9 72 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 MS4A10Q96PG2 267 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 NDUFAF3Q9BU61 184 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 C19orf24Q9BVV8 132 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 FNDC4Q9H6D8 234 aaPredicted RBP16.71■□□□□ 0.27
CRAT-207ENST00000458362 SAP30LQ9HAJ7 183 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 SH3BGRL2Q9UJC5 107 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 PPIAL4AQ9Y536 164 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 ANKRD11Q6UB99 2663 aaPredicted RBP16.71■□□□□ 0.27
CRAT-207ENST00000458362 NAV3Q8IVL0 2385 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 F2Z2F3 143 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 FCN1O00602 326 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 IGHV3-48P01763 117 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 ERHP84090 104 aaKnown RBP16.71■□□□□ 0.27
CRAT-207ENST00000458362 ST6GALNAC3Q8NDV1 305 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 CCL17Q92583 94 aa16.71■□□□□ 0.27
CRAT-207ENST00000458362 TNFRSF13BO14836 293 aaPredicted RBP16.7■□□□□ 0.26
CRAT-207ENST00000458362 IGLV2-23P01705 113 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 CD33P20138 364 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 OR10X1Q8NGY0 326 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 CACNG8Q8WXS5 425 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 IGF2BP2-AS1Q96M15 143 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 CTSZQ9UBR2 303 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 ACACAQ13085 2346 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 SPINK4O60575 86 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 SERF1AO75920 110 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 CRISP2P16562 243 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 USF1P22415 310 aaPredicted RBP16.7■□□□□ 0.26
CRAT-207ENST00000458362 TDGF1P3P51864 188 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 NAGKQ9UJ70 344 aa16.7■□□□□ 0.26
CRAT-207ENST00000458362 POLR3KQ9Y2Y1 108 aaPredicted RBP16.7■□□□□ 0.26
CRAT-207ENST00000458362 A0A1W2PRE2 83 aa16.69■□□□□ 0.26
CRAT-207ENST00000458362 SNURFLB1AK76 121 aa16.69■□□□□ 0.26
CRAT-207ENST00000458362 INS-IGF2F8WCM5 200 aa16.69■□□□□ 0.26
CRAT-207ENST00000458362 TIGITQ495A1 244 aa16.69■□□□□ 0.26
CRAT-207ENST00000458362 MISP3Q96FF7 219 aa16.69■□□□□ 0.26
CRAT-207ENST00000458362 ZNF430Q9H8G1 570 aaPredicted RBP16.69■□□□□ 0.26
CRAT-207ENST00000458362 PRRG2O14669 202 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 ST6GALNAC6Q969X2 333 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 RITA1Q96K30 269 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 MRPL32Q9BYC8 188 aaKnown RBP16.68■□□□□ 0.26
CRAT-207ENST00000458362 DNAJC4Q9NNZ3 241 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 OSTCQ9NRP0 149 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 TPSG1Q9NRR2 321 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 MRPL36Q9P0J6 103 aaKnown RBP16.68■□□□□ 0.26
CRAT-207ENST00000458362 PCNX1Q96RV3 2341 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 NDUFB3O43676 98 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 TCL1AP56279 114 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 UBE2L3P68036 154 aaKnown RBP16.68■□□□□ 0.26
CRAT-207ENST00000458362 TCF15Q12870 199 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 Q6ZWC4 215 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 OR4C13Q8NGP0 309 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 TMEM106BQ9NUM4 274 aa16.68■□□□□ 0.26
CRAT-207ENST00000458362 ZFHX2Q9C0A1 2572 aaPredicted RBP16.68■□□□□ 0.26
CRAT-207ENST00000458362 IGKV1D-37A0A075B6S9 117 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 PYYP10082 97 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 PPOXP50336 477 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 DLX6P56179 175 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 SLC35B1P78383 322 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 ASPHD1Q5U4P2 390 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 PATE2Q6UY27 113 aa16.67■□□□□ 0.26
CRAT-207ENST00000458362 PDPNQ86YL7 162 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms