RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 PAFAH1B2P68402 229 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 CENPWQ5EE01 88 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 TGIF2LXQ8IUE1 241 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 OR1L6Q8NGR2 347 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 C22orf15Q8WYQ4 148 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 TNFRSF14Q92956 283 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 DNAJC4Q9NNZ3 241 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 DCAF16Q9NXF7 216 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 ZNF835Q9Y2P0 537 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 CUL9Q8IWT3 2517 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 CADP27708 2225 aa8.88□□□□□ -0.99
RFX3-211ENST00000458034 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 K7EN84 100 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 TNFRSF13BO14836 293 aaPredicted RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 CRYBB3P26998 211 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 ADMP35318 185 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 LGALS7P47929 136 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 TPPP2P59282 170 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 RANP62826 216 aaKnown RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 TCF15Q12870 199 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 C22orf34Q6ZV56 151 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 CMTM2Q8TAZ6 248 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 CCL17Q92583 94 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 RNASE6Q93091 150 aaKnown RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 SNRNP40Q96DI7 357 aaKnown RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 SLC25A33Q9BSK2 321 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 CHRDL1Q9BU40 450 aa8.87□□□□□ -0.99
RFX3-211ENST00000458034 MRPL18Q9H0U6 180 aaKnown RBP8.87□□□□□ -0.99
RFX3-211ENST00000458034 ISLRO14498 428 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 CRISP2P16562 243 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 LOXP28300 417 aaPredicted RBP8.86□□□□□ -0.99
RFX3-211ENST00000458034 NBL1P41271 181 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 PPOXP50336 477 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 PRRX1P54821 245 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 TMEM155Q4W5P6 130 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 LBHQ53QV2 105 aaPredicted RBP8.86□□□□□ -0.99
RFX3-211ENST00000458034 C10orf113Q5VZT2 155 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 MMD2Q8IY49 270 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 TEX45Q8NA69 505 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 PRSS33Q8NF86 280 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 STXBP6Q8NFX7 210 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 OR10W1Q8NGF6 305 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 FAM122AQ96E09 287 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 ABHD17AQ96GS6 310 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 PAXXQ9BUH6 204 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 GNB1LQ9BYB4 327 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 PRO1933Q9H354 126 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 ZNRD1Q9P1U0 126 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 V9GYV3 84 aa8.86□□□□□ -0.99
RFX3-211ENST00000458034 IGKV1OR2-108A0A075B7D4 117 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 B9A039 149 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 CORTO00230 105 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 SLC17A3O00476 420 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 CD3EP07766 207 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 PAX1P15863 534 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 REG1BP48304 166 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 DLX6P56179 175 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
RFX3-211ENST00000458034 OR5AU1Q8NGC0 362 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 ST6GALNAC6Q969X2 333 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 PERPQ96FX8 193 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 SLC25A2Q9BXI2 301 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 TMEM133Q9H2Q1 129 aa8.85□□□□□ -0.99
RFX3-211ENST00000458034 AMMECR1Q9Y4X0 333 aaPredicted RBP8.85□□□□□ -0.99
RFX3-211ENST00000458034 IGHV1-69-2A0A0G2JMI3 117 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 PSMB11A5LHX3 300 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 SNURFLB1AK76 121 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 FCN1O00602 326 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 SCGB1D1O95968 90 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 IGLV2-23P01705 113 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 AMY1AP04745 511 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 IGHV1-8P0DP01 117 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 MGST1P10620 155 aaKnown RBP8.84□□□□□ -0.99
RFX3-211ENST00000458034 ESDP10768 282 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 CBLN1P23435 193 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 GATA2P23769 480 aaPredicted RBP8.84□□□□□ -0.99
RFX3-211ENST00000458034 APOBEC3AP31941 199 aaPredicted RBP8.84□□□□□ -0.99
RFX3-211ENST00000458034 COMPP49747 757 aaPredicted RBP8.84□□□□□ -0.99
RFX3-211ENST00000458034 Q0VG73 95 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 LYPD2Q6UXB3 125 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 MOB3BQ86TA1 216 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 OR8I2Q8N0Y5 310 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 BEND2Q8NDZ0 799 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 OR2T6Q8NHC8 308 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 TMEM190Q8WZ59 177 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 C14orf144Q96I85 54 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 FAM167A-AS1Q96KT0 104 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 MS4A10Q96PG2 267 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 CTSZQ9UBR2 303 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 SH3BGRL2Q9UJC5 107 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 CDC42EP3Q9UKI2 254 aa8.84□□□□□ -0.99
RFX3-211ENST00000458034 SHISA9B4DS77 424 aa8.83□□□□□ -1
RFX3-211ENST00000458034 E7EQL1 145 aa8.83□□□□□ -1
RFX3-211ENST00000458034 ENSAO43768 121 aaKnown RBP8.83□□□□□ -1
RFX3-211ENST00000458034 SLC25A17O43808 307 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms