RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 DCHS1Q96JQ0 3298 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 C21orf140B9A014 251 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 SPINT2O43291 252 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 CER1O95813 267 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-208ENST00000456385 KLF5Q13887 457 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-208ENST00000456385 ZNF841Q6ZN19 808 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 WIPF2Q8TF74 440 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-208ENST00000456385 TRIB1Q96RU8 372 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 S1PR3Q99500 378 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 ZPBPQ9BS86 351 aa8.44□□□□□ -1.06
CLIP4-208ENST00000456385 SMG1Q96Q15 3661 aaKnown RBP8.44□□□□□ -1.06
CLIP4-208ENST00000456385 C15orf61A6NNL5 157 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 HIGD1CA8MV81 97 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 PSG9Q00887 426 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 FOXE3Q13461 319 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 LYSMD4Q5XG99 296 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 DEFB125Q8N687 156 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 NUDT11Q96G61 164 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 FZR1Q9UM11 496 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 BOKQ9UMX3 212 aaPredicted RBP8.43□□□□□ -1.06
CLIP4-208ENST00000456385 PRR14LQ5THK1 2151 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 TRGV8A0A0C4DH27 118 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 GAGE12BA1L429 117 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 WDR82Q6UXN9 313 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 CD177Q8N6Q3 437 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 OR9G1Q8NH87 305 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 SGK494Q96LW2 274 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 COMMD5Q9GZQ3 224 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 LOC400499M0QZD8 3231 aa8.43□□□□□ -1.06
CLIP4-208ENST00000456385 PCSK5Q92824 1860 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 A0A087X0K7 114 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 H0Y8G0 127 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 ADH4P08319 380 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 PLGLB1Q02325 96 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 FAM90A1Q86YD7 464 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 SPEM1Q8N4L4 309 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 KLF14Q8TD94 323 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-208ENST00000456385 IFI27L2Q9H2X8 130 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 TNCP24821 2201 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 IGHV1-24A0A0C4DH33 117 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 A0A1W2PRE2 83 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 IQCF6A8MYZ5 107 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 CRXO43186 299 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-208ENST00000456385 SAP30O75446 220 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 PYYP10082 97 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 HSPE1P61604 102 aaKnown RBP8.42□□□□□ -1.06
CLIP4-208ENST00000456385 SARAFQ96BY9 339 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 PMCHL2Q9BQD1 86 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 SLC25A33Q9BSK2 321 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 ENY2Q9NPA8 101 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 TMEM14BQ9NUH8 114 aa8.42□□□□□ -1.06
CLIP4-208ENST00000456385 OR2J3O76001 311 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 TNFSF15O95150 251 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 RIPPLY3P57055 190 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 RASL11AQ6T310 242 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 TTTY12Q9BZ98 90 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 AMMECR1Q9Y4X0 333 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-208ENST00000456385 SNAI2O43623 268 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 C8orf88P0DMB2 117 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 ZNF138P52744 262 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 UBE2L3P68036 154 aaKnown RBP8.41□□□□□ -1.06
CLIP4-208ENST00000456385 GABRA6Q16445 453 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 SSX8Q7RTT4 187 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 TCF24Q7RTU0 167 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 NANOS1Q8WY41 292 aaKnown RBP8.41□□□□□ -1.06
CLIP4-208ENST00000456385 DDB2Q92466 427 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 GRAMD2BQ96HH9 432 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 OR2V2Q96R30 315 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 FAM173AQ9BQD7 235 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 SLC25A2Q9BXI2 301 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 IDI2-AS1Q9NZ38 188 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 KLF13Q9Y2Y9 288 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-208ENST00000456385 KNTC1P50748 2209 aa8.41□□□□□ -1.06
CLIP4-208ENST00000456385 LYZL6O75951 148 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 TOX4O94842 621 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 LEPROTL1O95214 131 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 LOXL3P58215 753 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 TAS2R45P59539 299 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
CLIP4-208ENST00000456385 GNG5P63218 68 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 TMEM251Q8N6I4 163 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 CORO2AQ92828 525 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 SCRT2Q9NQ03 307 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 FOXA2Q9Y261 457 aaPredicted RBP8.4□□□□□ -1.06
CLIP4-208ENST00000456385 ZNF835Q9Y2P0 537 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
CLIP4-208ENST00000456385 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 AHCTF1Q8WYP5 2266 aa8.4□□□□□ -1.06
CLIP4-208ENST00000456385 TMEM238C9JI98 176 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms