RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SCARF2Q96GP6 870 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 WFDC1Q9HC57 220 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF688P0C7X2 276 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 CTHRC1Q96CG8 243 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 GCN1Q92616 2671 aaKnown RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SPINT1O43278 529 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SYNGR3O43761 229 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 NAPSAO96009 420 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 CTAG1AP78358 180 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM187Q14656 261 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 VHLLQ6RSH7 139 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 PCSK4Q6UW60 755 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 HIST1H2BLQ99880 126 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 TRBV20OR9-2A0A075B6H5 130 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 DLEU1O43261 78 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 CXCL13O43927 109 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 NDUFB8O95169 186 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 ACTL10Q5JWF8 245 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 THSD4Q6ZMP0 1018 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 SSBP3Q9BWW4 388 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 DUSP15Q9H1R2 295 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 HOXA3O43365 443 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 NBEAP1P0C6P0 100 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 IGLV3-21P80748 117 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 PRSS8Q16651 343 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 KIAA1644Q3SXP7 199 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 TCF19Q9Y242 345 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 TRAV8-7A0A075B6U6 113 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 IGHV1OR21-1A0A087WYE8 117 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 IGLV3-32A0A0A0MS00 114 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 HOXD3P31249 432 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 C12orf49Q9H741 205 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM202A6NGA9 273 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 KLHDC2Q9Y2U9 406 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 RND2P52198 227 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 MEIG1Q5JSS6 88 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF880Q6PDB4 577 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 FAM214BQ7L5A3 538 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 OR11H4Q8NGC9 324 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 C8orf46Q8TAG6 207 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 TRAV8-4A0A0B4J246 113 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 C1QAP02745 245 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 SRP19P09132 144 aaKnown RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 ZIC4Q8N9L1 334 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 KLK13Q9UKR3 277 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 SPRY1O43609 319 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 MS4A4AQ96JQ5 239 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 NRTNQ99748 197 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 TINAGQ9UJW2 476 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 AMBPP02760 352 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 GPX1P07203 203 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 REG1BP48304 166 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 PRNTQ86SH4 94 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 LEPP41159 167 aa4.43□□□□□ -1.7
CSMD3-204ENST00000455883 DHCR7Q9UBM7 475 aaKnown RBP4.43□□□□□ -1.7
CSMD3-204ENST00000455883 FAM157AC9JC47 383 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF708P17019 499 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CX3CL1P78423 397 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF818PQ6ZRF7 136 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 BCDIN3DQ7Z5W3 292 aaKnown RBP4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM141Q96I45 108 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TRGV9Q99603 122 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TRAV21A0A0B4J279 112 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 A0A1W2PPE3 182 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CSN3P07498 182 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 C3AR1Q16581 482 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 KHDC1LQ5JSQ8 128 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TP53INP2Q8IXH6 220 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 IFI27L1Q96BM0 104 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 OVOL1O14753 267 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 PGLYRP1O75594 196 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-204ENST00000455883 LEPROTO15243 131 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 SLC25A47Q6Q0C1 308 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 VN1R4Q7Z5H5 301 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 NABP2Q9BQ15 211 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CFHR5Q9BXR6 569 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 PEMTQ9UBM1 199 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TRBV7-9A0A0J9YWB2 115 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 C1QTNF5Q9BXJ0 243 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CCL28Q9NRJ3 127 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 MLNRO43193 412 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 FAM157BP0CG42 384 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CSRP3P50461 194 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 Q6ZT83 130 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM54Q969K7 222 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 SPACA5Q96QH8 159 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 LHX9Q9NQ69 397 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 UPK3AO75631 287 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 VSIG10L2P0DP72 767 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 PAX2Q02962 417 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 WFDC8Q8IUA0 241 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 CALYQ9NYX4 217 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 LENEPQ9Y5L5 61 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 EFEMP2O95967 443 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 C3orf36Q3SXR2 165 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 GFRALQ6UXV0 394 aa4.42□□□□□ -1.7
CSMD3-204ENST00000455883 FER1L6-AS1Q8NA97 138 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms