RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 LILRB2Q8N423 598 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 OR5T1Q8NG75 326 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 FAM110DQ8TAY7 271 aaPredicted RBP9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 TMEM170AQ8WVE7 144 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 BSCL2Q96G97 398 aaPredicted RBP9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 DUX5Q96PT3 197 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 GON7Q9BXV9 100 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 THYN1Q9P016 225 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 FBXL17Q9UF56 701 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ZNF580Q9UK33 172 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 MTORP42345 2549 aa9.87□□□□□ -0.83
HLA-DPA1-244ENST00000453337 RPS10-NUDT3A0A1W2PQS6 291 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 FNDC10F2Z333 226 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 IFNA5P01569 189 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 HILS1P60008 231 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 DLK1P80370 383 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 EXOSC2Q13868 293 aaKnown RBP9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ZNF266Q14584 549 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 CLINT1Q14677 625 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ECSCRQ19T08 205 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 SLC51BQ86UW2 128 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 HAPLN4Q86UW8 402 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ATP5SQ99766 215 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 SMIM3Q9BZL3 60 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ESM1Q9NQ30 184 aa9.86□□□□□ -0.83
HLA-DPA1-244ENST00000453337 FAM181BA6NEQ2 426 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 PRSS46E5RG02 174 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 CD69Q07108 199 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 Q6ZS46 218 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 Q8N2B8 174 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 SCGB1C1Q8TD33 95 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 MISP3Q96FF7 219 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 TMEM147Q9BVK8 224 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ZNF471Q9BX82 626 aaPredicted RBP9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 CYTL1Q9NRR1 136 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 UQCC1Q9NVA1 299 aa9.85□□□□□ -0.83
HLA-DPA1-244ENST00000453337 G3V318 75 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 TCF21O43680 179 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 OPRK1P41145 380 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 MFAP2P55001 183 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 UBA52P62987 128 aaKnown RBP9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 KLK9Q2XQG4 91 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 C19orf54Q5BKX5 351 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 RPL7L1Q6DKI1 246 aaKnown RBP9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 UBAC2Q8NBM4 344 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ZNF702PQ9H963 129 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 NPVFQ9HCQ7 196 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 ZNF355PQ9NSJ1 428 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 KLK9Q9UKQ9 250 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 SVEP1Q4LDE5 3571 aa9.84□□□□□ -0.83
HLA-DPA1-244ENST00000453337 IGLV11-55A0A075B6I3 123 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 H3BUA1 57 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 BRI3O95415 125 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TPT1P13693 172 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PPIFP30405 207 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 RAB31Q13636 194 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 OR2T6Q8NHC8 308 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NOL4LQ96MY1 436 aaPredicted RBP9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FANCD2OSQ96PS1 177 aa9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SMCO3A2RU48 225 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TMEM89A2RUT3 159 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 MPDU1O75352 247 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 MT-CO2P00403 227 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SLC35B1P78383 322 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 GAMTQ14353 236 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 MLANAQ16655 118 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 EIF5AL1Q6IS14 154 aaKnown RBP9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TMEM144Q7Z5S9 345 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 BAP18Q8IXM2 172 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NECAP1Q8NC96 275 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ARV1Q9H2C2 271 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FNDC4Q9H6D8 234 aaPredicted RBP9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SLA2Q9H6Q3 261 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 LINC00527Q9UJ94 153 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FBXL7Q9UJT9 491 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 DMRT1Q9Y5R6 373 aa9.82□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TRBV9A0A0B4J1U6 114 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 I3L2K1 104 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 OR2J3O76001 311 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PRH1P02810 166 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 AKR1C1Q04828 323 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TEPPQ6URK8 271 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 C19orf35Q6ZS72 473 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 Q6ZSV7 163 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 CENPVQ7Z7K6 275 aaPredicted RBP9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TMEM116Q8NCL8 245 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 VN1R17PQ8TDU5 208 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ST8SIA2Q92186 375 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 GNPNAT1Q96EK6 184 aaPredicted RBP9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 CXorf58Q96LI9 332 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 GINS3Q9BRX5 216 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms