RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 AKR1C2P52895 323 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
CPSF4-208ENST00000452047 SSBP1Q04837 148 aaKnown RBP9.29□□□□□ -0.92
CPSF4-208ENST00000452047 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 STEAP1BQ6NZ63 245 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 TXN2Q99757 166 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 C20orf24Q9BUV8 137 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 GGTLC1Q9BX51 225 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 DNAH1Q9P2D7 4330 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 LOC102724200A0A096LPH7 203 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 A0A0G2JRQ6 117 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 NUPL2O15504 423 aaKnown RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 CTSDP07339 412 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 UCP1P25874 307 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 MFAP4P55083 255 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 ERHP84090 104 aaKnown RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 RELQ04864 619 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 SP6Q3SY56 376 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 SCGB2B2Q4G0G5 96 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 PVRIGQ6DKI7 326 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 FAAP20Q6NZ36 180 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 CCDC71LQ8N9Z2 235 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 ZFAND1Q8TCF1 268 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 MARCH1Q8TCQ1 289 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 SMIM4Q8WVI0 70 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 NXF2Q9GZY0 626 aaKnown RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
CPSF4-208ENST00000452047 COPZ2Q9P299 210 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
CPSF4-208ENST00000452047 LAMTOR1Q6IAA8 161 aa9.27□□□□□ -0.93
CPSF4-208ENST00000452047 CLVS1Q8IUQ0 354 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-208ENST00000452047 SLC35G3Q8N808 338 aa9.27□□□□□ -0.93
CPSF4-208ENST00000452047 RAB2BQ8WUD1 216 aa9.27□□□□□ -0.93
CPSF4-208ENST00000452047 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
CPSF4-208ENST00000452047 BCL7BQ9BQE9 202 aa9.27□□□□□ -0.93
CPSF4-208ENST00000452047 OVOL2Q9BRP0 275 aa9.27□□□□□ -0.93
CPSF4-208ENST00000452047 UBQLN2Q9UHD9 624 aa9.27□□□□□ -0.93
CPSF4-208ENST00000452047 IGHV7-4-1A0A0J9YVY3 117 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 CHEK1O14757 476 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 CTDSPLO15194 276 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 NOL3O60936 208 aaKnown RBP9.26□□□□□ -0.93
CPSF4-208ENST00000452047 B3GALNT1O75752 331 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 ATG12O94817 140 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 RNASE2P10153 161 aaKnown RBP9.26□□□□□ -0.93
CPSF4-208ENST00000452047 TMBIM6P55061 237 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 MEF2DQ14814 521 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 TRIM16LQ309B1 348 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 AARDQ4LEZ3 155 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 OR4C16Q8NGL9 310 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 LHFPL5Q8TAF8 219 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 RNF2Q99496 336 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-208ENST00000452047 TMEM222Q9H0R3 208 aa9.26□□□□□ -0.93
CPSF4-208ENST00000452047 OR4C46A6NHA9 309 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 GNG7O60262 68 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 YIF1AO95070 293 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 CDS2O95674 445 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 IFNA17P01571 189 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 SNCAP37840 140 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 ETV6P41212 452 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 SURF2Q15527 256 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-208ENST00000452047 BSXQ3C1V8 233 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 Q6ZRM9 215 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 TMEM116Q8NCL8 245 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 GLYATL2Q8WU03 294 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 PPP1R14BQ96C90 147 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 RRNAD1Q96FB5 475 aaKnown RBP9.25□□□□□ -0.93
CPSF4-208ENST00000452047 DIRAS2Q96HU8 199 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 RHPN1-AS1Q9BWJ2 59 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 NAA60Q9H7X0 242 aa9.25□□□□□ -0.93
CPSF4-208ENST00000452047 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 CORTO00230 105 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 AKAIN1P0CW23 69 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 NPBWR1P48145 328 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 HOXA1P49639 335 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 IL18Q14116 193 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 FAM90A2PQ658T7 463 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 TOMM20LQ6UXN7 152 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 LINC00299Q6ZSB3 139 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 Q6ZWC4 215 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 FAM219AQ8IW50 185 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 IL17DQ8TAD2 202 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 PDCD10Q9BUL8 212 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 SLIRPQ9GZT3 109 aaKnown RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 MRPL36Q9P0J6 103 aaKnown RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 RABL2AQ9UBK7 228 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 RABL2BQ9UNT1 228 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 GPR132Q9UNW8 380 aa9.24□□□□□ -0.93
CPSF4-208ENST00000452047 C14orf166Q9Y224 244 aaKnown RBP9.24□□□□□ -0.93
CPSF4-208ENST00000452047 PLECQ15149 4684 aaKnown RBP9.23□□□□□ -0.93
CPSF4-208ENST00000452047 TRAV14DV4A0A0A6YYC5 116 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms