RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 UBQLN2Q9UHD9 624 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 SOX21Q9Y651 276 aaPredicted RBP6.78□□□□□ -1.32
HCG18-238ENST00000449544 URGCP-MRPS24S4R325 110 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 SIX6O95475 246 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 TMEM50BP56557 158 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 LYZL2Q7Z4W2 148 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 SSX5O60225 188 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 SFT2D2O95562 160 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 AVPP01185 164 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 S100A11P31949 105 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 OXLD1Q5BKU9 147 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 FAM71F2Q6NXP2 309 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 CABLES2Q9BTV7 478 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 ACTR3CQ9C0K3 210 aaPredicted RBP6.77□□□□□ -1.33
HCG18-238ENST00000449544 PPP1R1AQ13522 171 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 NCOR1P1Q9H4R4 102 aa6.77□□□□□ -1.33
HCG18-238ENST00000449544 HLA-DRB1P01911 266 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 MBP02144 154 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 IGFBP3P17936 291 aaPredicted RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 MEOX2P50222 304 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 RAB4BP61018 213 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 PJVKQ0ZLH3 352 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ZNF674Q2M3X9 581 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 RNF2Q99496 336 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 NPVFQ9HCQ7 196 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 PRR13Q9NZ81 148 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ELF5Q9UKW6 265 aaPredicted RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ZNF256Q9Y2P7 627 aaPredicted RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 XKRY2A2RUG3 117 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 RBFOX2O43251 390 aaKnown RBP eCLIP6.76□□□□□ -1.332e-12■■■■■ 29.1
HCG18-238ENST00000449544 AMY1AP04745 511 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 LGALS1P09382 135 aaKnown RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 IRF3Q14653 427 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 LINC00311Q8N616 119 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 FBLN5Q9UBX5 448 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 FLVCR2Q9UPI3 526 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ZNF701M0R085 212 aaPredicted RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 GPX1P07203 203 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 C17orf58Q2M2W7 97 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ZNF383Q8NA42 475 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 NHLRC2Q8NBF2 726 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 FAM213BQ8TBF2 198 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 RSPO3Q9BXY4 272 aaPredicted RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 KLK5Q9Y337 293 aaPredicted RBP6.76□□□□□ -1.33
HCG18-238ENST00000449544 CNTFRP26992 372 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 DEFB131AP59861 70 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 B2MP61769 119 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ACTL10Q5JWF8 245 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 VAX1Q5SQQ9 334 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
HCG18-238ENST00000449544 ICMTO60725 284 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 DUSP14O95147 198 aaKnown RBP6.75□□□□□ -1.33
HCG18-238ENST00000449544 IGKV1-16P04430 117 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 SLURP1P55000 103 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 ATP5IP56385 69 aaPredicted RBP6.75□□□□□ -1.33
HCG18-238ENST00000449544 ATP6V1FQ16864 119 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 OR2G3Q8NGZ4 309 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 TMEM222Q9H0R3 208 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 MBNL3Q9NUK0 354 aaKnown RBP6.75□□□□□ -1.33
HCG18-238ENST00000449544 TMEM187Q14656 261 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 FBLN7Q53RD9 439 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 C17orf50Q8WW18 174 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 VWC2LB2RUY7 222 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 CDS2O95674 445 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 DIAPH2-AS1Q14236 149 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 SOHLH1Q5JUK2 328 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 LCN15Q6UWW0 184 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 CLEC18BQ6UXF7 455 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 DEDD2Q8WXF8 326 aa6.75□□□□□ -1.33
HCG18-238ENST00000449544 RCC2Q9P258 522 aaKnown RBP6.75□□□□□ -1.33
HCG18-238ENST00000449544 A0A0B4J293 547 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 A6NDX4 124 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 FAM24AA6NFZ4 105 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 PPP5D1E7EU14 171 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 RPL12P30050 165 aaKnown RBP6.74□□□□□ -1.33
HCG18-238ENST00000449544 AKR1C3P42330 323 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 FFAR4Q5NUL3 377 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 PRR27Q6MZM9 219 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 PIFOQ8TCI5 191 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 FBLIM1Q8WUP2 373 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 GNPNAT1Q96EK6 184 aaPredicted RBP6.74□□□□□ -1.33
HCG18-238ENST00000449544 TREM1Q9NP99 234 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 BET1LQ9NYM9 111 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 HLA-DQB1P01920 261 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 MFAP2P55001 183 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 NDPQ00604 133 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 DUXBA0A1W2PPF3 345 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 FCN1O00602 326 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 NDUFB8O95169 186 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
HCG18-238ENST00000449544 OR2C3Q8N628 320 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 OR10W1Q8NGF6 305 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 IFI27L2Q9H2X8 130 aa6.74□□□□□ -1.33
HCG18-238ENST00000449544 TECRQ9NZ01 308 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms