RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 AREGP15514 252 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 PAX8Q06710 450 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 LINC01590Q5TEZ4 76 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR1S2Q8NGQ3 325 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 C11orf45Q8TAV5 145 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 YIPF5Q969M3 257 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 Q9HAA7 133 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 PSENENQ9NZ42 101 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR2T8A6NH00 312 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 PRSS2P07478 247 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 IL6RP08887 468 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR5AL1P0C617 328 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 MMP9P14780 707 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 INSL3P51460 131 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 MFAP2P55001 183 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 DEFB136Q30KP8 78 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 DMKNQ6E0U4 476 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 LRRC75AQ8NAA5 344 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 EDA2RQ9HAV5 297 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 RAI1Q7Z5J4 1906 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 PAX1P15863 534 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 BTF3P20290 206 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 SUMO1P63165 101 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 TIGITQ495A1 244 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 MRPL20Q9BYC9 149 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 C21orf62Q9NYP8 219 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 CACNG5Q9UF02 275 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 NPIPB6E9PJ23 425 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 DUSP14O95147 198 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 FCGR3AP08637 254 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR9G9P0C7N8 305 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 MYCNOSP40205 109 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 CAMLGP49069 296 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 USMG5Q96IX5 58 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 CTDSP1Q9GZU7 261 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 PCNTO95613 3336 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM272A0A1B0GTI8 110 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 PQLC2LA1A4F0 135 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 ELANEP08246 267 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 FABP2P12104 132 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 KLF9Q13886 244 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 PSMG4Q5JS54 123 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 RNASEKQ6P5S7 137 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 ABHD1Q96SE0 405 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM70Q9BUB7 260 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 JKAMPQ9P055 326 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 TEX50A0A1B0GTY4 177 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 LYRM1O43325 122 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 SMIM18P0DKX4 95 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF295-AS1Q8N0V1 137 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 RAB37Q96AX2 223 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 KLHDC3Q9BQ90 382 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 MLNRO43193 412 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 RUNX1Q01196 453 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 FABP5Q01469 135 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 SSBP1Q04837 148 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 C4orf48Q5BLP8 95 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 WFDC12Q8WWY7 111 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 CFDP00746 253 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 TPT1P13693 172 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 CDKN1BP46527 198 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR51S1Q8NGJ8 323 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 GAFA1Q96PS6 74 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGLV2-18A0A075B6J9 118 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 C22orf46C9J442 243 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 TCTEX1D4Q5JR98 221 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 GAPTQ8N292 157 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR4P4Q8NGL7 312 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 C1orf159Q96HA4 380 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 DUSP21Q9H596 190 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 USP24Q9UPU5 2620 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 A0A0D9SG52 128 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 C10orf142B7Z368 130 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 SPDEFO95238 335 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 RANP62826 216 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 HAGHQ16775 308 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 LYG2Q86SG7 212 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM116Q8NCL8 245 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF586Q9NXT0 402 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 CENPFP49454 3210 aa4.6□□□□□ -1.67
CDC42BPA-209ENST00000448940 SHISA3A0PJX4 238 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGHV2-70P01814 119 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 AMTP48728 403 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 CD83Q01151 205 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 INSL4Q14641 139 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 LINC01559Q495D7 138 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 SLC24A4Q8NFF2 622 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 SRSF12Q8WXF0 261 aaKnown RBP4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 YIPF6Q96EC8 236 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 RNF5Q99942 180 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 GGTLC1Q9BX51 225 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 SLC45A2Q9UMX9 530 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 TCF19Q9Y242 345 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 PLXNB3Q9ULL4 1909 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 AGPAT2O15120 278 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR2C1O95371 312 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 CDS2O95674 445 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 FAM74A4Q5TZK3 123 aa4.59□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR2T35Q8NGX2 323 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms