RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 C6orf223Q8N319 242 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 NKAIN3Q8N8D7 197 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 VN1R17PQ8TDU5 208 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 GIMAP1Q8WWP7 306 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 BSCL2Q96G97 398 aaPredicted RBP4.15□□□□□ -1.75
USP49-205ENST00000448078 ATP6V0BQ99437 205 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 GINS4Q9BRT9 223 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 PLCXD1Q9NUJ7 323 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 RDH8Q9NYR8 311 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 SMPXQ9UHP9 88 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 ARL2BPQ9Y2Y0 163 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 PKHD1P08F94 4074 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 TRAV14DV4A0A0A6YYC5 116 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 TRBV6-6A0A0A6YYG2 114 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 IGHV3-35A0A0C4DH35 117 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 A0A1B0GW64 132 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 IRGMA1A4Y4 181 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 SRRM4A7MD48 611 aaKnown RBP4.14□□□□□ -1.75
USP49-205ENST00000448078 J3QRE1 110 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 TGOLN2O43493 480 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 NAPSAO96009 420 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 IFNA5P01569 189 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 CRYGCP07315 174 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 SRMP19623 302 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 CALB2P22676 271 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 MAPK3P27361 379 aaPredicted RBP4.14□□□□□ -1.75
USP49-205ENST00000448078 EIF2B2P49770 351 aaKnown RBP4.14□□□□□ -1.75
USP49-205ENST00000448078 HLA-DRB3P79483 266 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 ARFRP1Q13795 201 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 Q499Y3 187 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 YIF1BQ5BJH7 314 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 SLC25A24Q6NUK1 477 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 UNQ9165/PRO28630Q6UXU0 137 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 IDO2Q6ZQW0 420 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 C6orf201Q7Z4U5 140 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 HSD17B13Q7Z5P4 300 aaPredicted RBP4.14□□□□□ -1.75
USP49-205ENST00000448078 CEACAM19Q7Z692 300 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 Q8NAQ8 132 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 OR6M1Q8NGM8 313 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 OR4A4PQ8NGN8 299 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 C18orf15Q96N68 181 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 SLC29A1Q99808 456 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 GINS3Q9BRX5 216 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 CHRDL1Q9BU40 450 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 RHPN1-AS1Q9BWJ2 59 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 TMEM59Q9BXS4 323 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 ZNF436Q9C0F3 470 aaPredicted RBP4.14□□□□□ -1.75
USP49-205ENST00000448078 OR2D2Q9H210 308 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 TMEM231Q9H6L2 316 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 C12orf4Q9NQ89 552 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 SDHAF2Q9NX18 166 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 BABAM2Q9NXR7 383 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 S4R3C0 116 aa4.14□□□□□ -1.75
USP49-205ENST00000448078 IGKV3-7A0A075B6H7 116 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 SMIM9A6NGZ8 99 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 OR2T8A6NH00 312 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 BET1O15155 118 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 NUPL2O15504 423 aaKnown RBP4.13□□□□□ -1.75
USP49-205ENST00000448078 FCGR3BO75015 233 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 CD74P04233 296 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 CD3GP09693 182 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 RBMY1CP0DJD4 496 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 CD36P16671 472 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 MYL12AP19105 171 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 DCKP27707 260 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 TALDO1P37837 337 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 CCL18P55774 89 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 RPL8P62917 257 aaKnown RBP4.13□□□□□ -1.75
USP49-205ENST00000448078 RPS27AP62979 156 aaKnown RBP4.13□□□□□ -1.75
USP49-205ENST00000448078 C12orf74Q32Q52 190 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 Q56UQ5 140 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 ZNF880Q6PDB4 577 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 SPATA12Q7Z6I5 190 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 C5orf24Q7Z6I8 188 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 C15orf53Q8NAA6 179 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 OR4S2Q8NH73 311 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 ZNF502Q8TBZ5 544 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 NARS2Q96I59 477 aaKnown RBP4.13□□□□□ -1.75
USP49-205ENST00000448078 CMSS1Q9BQ75 279 aaKnown RBP4.13□□□□□ -1.75
USP49-205ENST00000448078 COMMD5Q9GZQ3 224 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 Q9N2K0 584 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 OR1A1Q9P1Q5 309 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 ETV7Q9Y603 341 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
USP49-205ENST00000448078 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 TRAV2A0A0B4J234 112 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 IGHV7-4-1A0A0J9YVY3 117 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 NBDYA0A0U1RRE5 68 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 ZNF705EA8MWA4 302 aaPredicted RBP4.12□□□□□ -1.75
USP49-205ENST00000448078 GYG2O15488 501 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 FABP7O15540 132 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 DIRAS3O95661 229 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 ZNF735P0CB33 412 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 SAA1P0DJI8 122 aaPredicted RBP4.12□□□□□ -1.75
USP49-205ENST00000448078 HTN3P15516 51 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 IGFBP3P17936 291 aaPredicted RBP4.12□□□□□ -1.75
USP49-205ENST00000448078 GTF2A1P52655 376 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms