RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 PINX1Q96BK5 328 aaKnown RBP10.9□□□□□ -0.66
SSBP3-208ENST00000444533 SEC22CQ9BRL7 303 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 KLK9Q9UKQ9 250 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 U3KQ87 197 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 C5orf51A6NDU8 294 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
SSBP3-208ENST00000444533 ADAP1O75689 374 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 ARL3P36405 182 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 ATP5IP56385 69 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-208ENST00000444533 DCTN2Q13561 401 aaKnown RBP10.89□□□□□ -0.67
SSBP3-208ENST00000444533 IAH1Q2TAA2 248 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-208ENST00000444533 Q56UQ5 140 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 CLEC19AQ6UXS0 136 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 WFDC9Q8NEX5 89 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 SLC24A4Q8NFF2 622 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 ATP6V0BQ99437 205 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 ELOVL1Q9BW60 279 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 RBKSQ9H477 322 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 C21orf62Q9NYP8 219 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
SSBP3-208ENST00000444533 ZMAT5Q9UDW3 170 aaKnown RBP10.89□□□□□ -0.67
SSBP3-208ENST00000444533 SNRPGP15A8MWD9 76 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 OVOL1O14753 267 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 NPY1RP25929 384 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-208ENST00000444533 OPRK1P41145 380 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 NKX2-1P43699 371 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-208ENST00000444533 MFAP4P55083 255 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 RAB11AP62491 216 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 FAM106AQ4KMX7 169 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 ETFRF1Q6IPR1 90 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 MARVELD1Q9BSK0 173 aa10.88□□□□□ -0.67
SSBP3-208ENST00000444533 MFSD2BA6NFX1 497 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 NUPL2O15504 423 aaKnown RBP10.87□□□□□ -0.67
SSBP3-208ENST00000444533 SYNGR2O43760 224 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 PITX3O75364 302 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 SCGB1D2O95969 90 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 MT-CO2P00403 227 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 IFNA4P05014 189 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 CLEC3BP05452 202 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
SSBP3-208ENST00000444533 GPR183P32249 361 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 NPBWR1P48145 328 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 SLURP1P55000 103 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 RGS21Q2M5E4 152 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 C2orf83Q53S99 150 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 ACSM6Q6P461 480 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 GSG1LQ6UXU4 331 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 RNASEH2CQ8TDP1 164 aaKnown RBP10.87□□□□□ -0.67
SSBP3-208ENST00000444533 DCUN1D4Q92564 292 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-208ENST00000444533 TXN2Q99757 166 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 PEMTQ9UBM1 199 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 PAIP2BQ9ULR5 123 aaKnown RBP10.87□□□□□ -0.67
SSBP3-208ENST00000444533 S4R3C0 116 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 DNHD1Q96M86 4753 aa10.87□□□□□ -0.67
SSBP3-208ENST00000444533 WNK1Q9H4A3 2382 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 SEC14L6B5MCN3 397 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 SSNA1O43805 119 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 GNG7O60262 68 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 INSL3P51460 131 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 C1QL4Q86Z23 238 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 ZNF502Q8TBZ5 544 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 SCARB1Q8WTV0 552 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 DLX4Q92988 240 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-208ENST00000444533 OR4C12Q96R67 309 aa10.86□□□□□ -0.67
SSBP3-208ENST00000444533 IGHV3-21A0A0B4J1V1 117 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 PPP5D1E7EU14 171 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 IAPPP10997 89 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 IGLL1P15814 213 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 MFAP2P55001 183 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 SYNJ2BPP57105 145 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-208ENST00000444533 ZBTB8BQ8NAP8 495 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-208ENST00000444533 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 MAGT1Q9H0U3 335 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 DMRT1Q9Y5R6 373 aa10.85□□□□□ -0.67
SSBP3-208ENST00000444533 ZNF320A2RRD8 509 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 MPTX1A8MV57 137 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 I3L2K1 104 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 K7EIM0 57 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 L7N2F9 121 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 BMPR1BO00238 502 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 CCSO14618 274 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 TGOLN2O43493 480 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 SAP30O75446 220 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 SLC25A4P12235 298 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 PVALBP20472 110 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-208ENST00000444533 VAMP2P63027 116 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 ID3Q02535 119 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-208ENST00000444533 BSXQ3C1V8 233 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms