RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CTXND1A0A1B0GTU2 59 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 CD8AP01732 235 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 SERF2P84101 59 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 PTTG1IPP53801 180 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 RUNX1Q01196 453 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 IGHV3-23P01764 117 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 GPR183P32249 361 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 RAB9AP51151 201 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 QRFPP83859 136 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 Q71RC1 249 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 WDR61Q9GZS3 305 aaKnown RBP11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 J3QLI3 93 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 UBE2E1P51965 193 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 MIC13Q5XKP0 118 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 LMO1P25800 156 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 ZNF581Q9P0T4 197 aa11.59□□□□□ -0.55
SMARCA4-204ENST00000444061 TCRBV4S1A1TA0A5B7 111 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 CXorf1O96002 111 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 ERVFC1-1P60608 527 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 PAX5Q02548 391 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 LINC00527Q9UJ94 153 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 A8MXK9 166 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 J3KRW8 73 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 IL4P05112 153 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 HTN1P15515 57 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 RNF5Q99942 180 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 IFI27L2Q9H2X8 130 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 HIVEP2P31629 2446 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 GNG4P50150 75 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 NRGNQ92686 78 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 RSG1Q9BU20 258 aa11.58□□□□□ -0.56
SMARCA4-204ENST00000444061 RAMP3O60896 148 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 RPL7P18124 248 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 LOXP28300 417 aaPredicted RBP11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 CLEC19AQ6UXS0 136 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 GCGP01275 180 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 DLX6P56179 175 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 CXorf65A6NEN9 183 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 SNRPCP09234 159 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 OR9G9P0C7N8 305 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 RUSC1-AS1Q66K80 236 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 DNAJC4Q9NNZ3 241 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 DBX1A6NMT0 343 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 SLC31A2O15432 143 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 ERVK11-1P61568 191 aa11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 EIF4E3Q8N5X7 224 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-204ENST00000444061 SERTM2A0A1B0GWG4 89 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 C15orf61A6NNL5 157 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 TMEM177Q53S58 311 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV3OR16-13A0A075B7E8 117 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV3-74A0A0B4J1X5 117 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 OR5AU1Q8NGC0 362 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 NAT8BQ9UHF3 227 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 PSMB11A5LHX3 300 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 H0Y8G0 127 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 RHOGP84095 191 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
SMARCA4-204ENST00000444061 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 FCN1O00602 326 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV4-39P01824 125 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 PMCHP20382 165 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 KAAG1Q9UBP8 84 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 EIF3GO75821 320 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 FAM157CP0CG43 387 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 CRISP2P16562 243 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 HOXA4Q00056 320 aaPredicted RBP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 NHLRC2Q8NBF2 726 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 E9PQ18 207 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 H2BFSP57053 126 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 AQP10Q96PS8 301 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 HELTA6NFD8 242 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 IGLV3-1P01715 115 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 CDX1P47902 265 aaPredicted RBP11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 C5orf64Q2M2E5 130 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 C5orf24Q7Z6I8 188 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 OR51G1Q8NGK1 321 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 OR10J6PQ8NGY7 276 aa11.55□□□□□ -0.56
SMARCA4-204ENST00000444061 PQLC2Q6ZP29 291 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 NCOR1P1Q9H4R4 102 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 ZNF735P0CB33 412 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 DDTP30046 118 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms