RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TP73-AS1Q9UF72 201 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 IGKV1D-42A0A075B6H8 117 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.07□□□□□ -2.24
PFDN4-202ENST00000441080 A0A0D9SG52 128 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 CTSDP07339 412 aaPredicted RBP1.07□□□□□ -2.24
PFDN4-202ENST00000441080 CRYGAP11844 174 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 CD79AP11912 226 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 SPI1P17947 270 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 NKX2-5P52952 324 aaPredicted RBP1.07□□□□□ -2.24
PFDN4-202ENST00000441080 PSME3P61289 254 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 DNAJC9Q8WXX5 260 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 IMP4Q96G21 291 aaKnown RBP1.07□□□□□ -2.24
PFDN4-202ENST00000441080 PPP1R2P1Q96PQ5 205 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 NIPSNAP1Q9BPW8 284 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 MRPL57Q9BQC6 102 aaKnown RBP1.07□□□□□ -2.24
PFDN4-202ENST00000441080 EIF4G1Q04637 1599 aaKnown RBP1.07□□□□□ -2.24
PFDN4-202ENST00000441080 RALGAPA2Q2PPJ7 1873 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 RP1P56715 2156 aa1.07□□□□□ -2.24
PFDN4-202ENST00000441080 CACNA1BQ00975 2339 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 ALPK2Q86TB3 2170 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 FADS1O60427 444 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 HIST1H1TP22492 207 aaPredicted RBP1.06□□□□□ -2.24
PFDN4-202ENST00000441080 BRS3P32247 399 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 SNRPD2P62316 118 aaKnown RBP1.06□□□□□ -2.24
PFDN4-202ENST00000441080 KCNJ8Q15842 424 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 LPCAT3Q6P1A2 487 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 MIR17HGQ75NE6 70 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 PHF13Q86YI8 300 aaPredicted RBP1.06□□□□□ -2.24
PFDN4-202ENST00000441080 ANKRD29Q8N6D5 301 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 OR4E2Q8NGC2 313 aa1.06□□□□□ -2.24
PFDN4-202ENST00000441080 C11orf68Q9H3H3 251 aaKnown RBP1.06□□□□□ -2.24
PFDN4-202ENST00000441080 ROS1P08922 2347 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 A0A087WX48 190 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 IGKV1-9A0A0C4DH69 117 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 DPRXA6NFQ7 191 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 M0R036 132 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 FAAHO00519 579 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 SULT1A1P50225 295 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 MED12LQ86YW9 2145 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 OR5A1Q8NGJ0 315 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 TERB2Q8NHR7 220 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 TOMM6Q96B49 74 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 PKIGQ9Y2B9 76 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 MAST2Q6P0Q8 1798 aa1.05□□□□□ -2.24
PFDN4-202ENST00000441080 TRAV9-1A0A075B6T8 112 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 AHSA1O95433 338 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 IFNA10P01566 189 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 ASAH2BP0C7U1 165 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 KHDC3LQ587J8 217 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 SPANXN5Q5MJ07 72 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 OOSP2Q86WS3 158 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 LINC00311Q8N616 119 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 H1FXQ92522 213 aaKnown RBP1.04□□□□□ -2.24
PFDN4-202ENST00000441080 ULBP3Q9BZM4 244 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 SLC39A9Q9NUM3 307 aa1.04□□□□□ -2.24
PFDN4-202ENST00000441080 EXOC1LA0A1B0GW35 172 aa1.03□□□□□ -2.24
PFDN4-202ENST00000441080 RPL5P46777 297 aaKnown RBP1.03□□□□□ -2.24
PFDN4-202ENST00000441080 ACOT6Q3I5F7 207 aaPredicted RBP1.03□□□□□ -2.24
PFDN4-202ENST00000441080 SPOPLQ6IQ16 392 aa1.03□□□□□ -2.24
PFDN4-202ENST00000441080 VPS29Q9UBQ0 182 aa1.03□□□□□ -2.24
PFDN4-202ENST00000441080 TMEM56-RWDD3S4R434 201 aa1.03□□□□□ -2.24
PFDN4-202ENST00000441080 TRBV6-7A0A0A0MS04 114 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 C2orf70A6NJV1 201 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 IFNA16P05015 189 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 COX6A1P12074 109 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 ZNF93P35789 620 aaPredicted RBP1.02□□□□□ -2.25
PFDN4-202ENST00000441080 RPS20P60866 119 aaKnown RBP1.02□□□□□ -2.25
PFDN4-202ENST00000441080 RHEBQ15382 184 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 TOPBP1Q92547 1522 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 DCUN1D1Q96GG9 259 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 TMEM147Q9BVK8 224 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 MIXL1Q9H2W2 232 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 ERGIC3Q9Y282 383 aa1.02□□□□□ -2.25
PFDN4-202ENST00000441080 STRCQ7RTU9 1775 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 SNAPC4Q5SXM2 1469 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 RIC1Q4ADV7 1423 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 MTUS2Q5JR59 1369 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 TRAV1-1A0A0B4J248 108 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 PQLC2LA1A4F0 135 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 SMIM23A6NLE4 172 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 GOLGA6L19H0YKK7 550 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 CHP2O43745 196 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 OR1I1O60431 355 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 CRYZL1O95825 349 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 TCL1BO95988 128 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 MIFP14174 115 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 DEFA1P59665 94 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 RAB4BP61018 213 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 HIST3H2BBQ8N257 126 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 SIGLECL1Q8N7X8 197 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 TSPAN32Q96QS1 320 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 MRPL27Q9P0M9 148 aaKnown RBP1.01□□□□□ -2.25
PFDN4-202ENST00000441080 KLK9Q9UKQ9 250 aa1.01□□□□□ -2.25
PFDN4-202ENST00000441080 WRNQ14191 1432 aaPredicted RBP eCLIP1□□□□□ -2.25
PFDN4-202ENST00000441080 NUP155O75694 1391 aa1□□□□□ -2.25
PFDN4-202ENST00000441080 LOC110117498A0A087WWA1 95 aa1□□□□□ -2.25
PFDN4-202ENST00000441080 OR4C46A6NHA9 309 aa1□□□□□ -2.25
PFDN4-202ENST00000441080 BUB1B-PAK6H3BSN5 160 aa1□□□□□ -2.25
PFDN4-202ENST00000441080 OR2T1O43869 369 aa1□□□□□ -2.25
PFDN4-202ENST00000441080 HYPMO75409 117 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms