RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 HBE1P02100 147 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-205ENST00000439958 RND2P52198 227 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-205ENST00000439958 SIRPDQ9H106 197 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 GSX1Q9H4S2 264 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-205ENST00000439958 ADCYAP1P18509 176 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 OR2T10Q8NGZ9 312 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-205ENST00000439958 TEX15Q9BXT5 2789 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 A0A1B0GW64 132 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 CYB5BO43169 146 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 UQCC3Q6UW78 93 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 SLC16A13Q7RTY0 426 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 STPG3Q8N7X2 389 aa12.06□□□□□ -0.48
CPSF7-205ENST00000439958 TGFAP01135 160 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 GAMTQ14353 236 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 SOHLH1Q5JUK2 328 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 TEX45Q8NA69 505 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 GATAD1Q8WUU5 269 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 GGTLC1Q9BX51 225 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 SPSB3Q6PJ21 355 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 LFNGQ8NES3 379 aa12.05□□□□□ -0.48
CPSF7-205ENST00000439958 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
CPSF7-205ENST00000439958 NPFFO15130 113 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 LY86O95711 162 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 ECSCRQ19T08 205 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 OR5G3P0C626 314 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 DLK1P80370 383 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 MRPL41Q8IXM3 137 aaKnown RBP12.04□□□□□ -0.48
CPSF7-205ENST00000439958 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 CGB1A6NKQ9 187 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 FAM106CPP0CH98 169 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 IGHV4-38-2P0DP08 117 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 BRS3P32247 399 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 COMPP49747 757 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-205ENST00000439958 SSBP2P81877 361 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-205ENST00000439958 SVBPQ8N300 66 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
CPSF7-205ENST00000439958 OR4A5Q8NH83 315 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 LINC00527Q9UJ94 153 aa12.04□□□□□ -0.48
CPSF7-205ENST00000439958 FLNBO75369 2602 aaKnown RBP12.03□□□□□ -0.48
CPSF7-205ENST00000439958 HSPB1P04792 205 aaKnown RBP12.03□□□□□ -0.48
CPSF7-205ENST00000439958 UBE2E1P51965 193 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 CYB561D1Q8N8Q1 229 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 SLC25A33Q9BSK2 321 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 CENPVL3A0A0U1RRI6 287 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 J3QKU1 62 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 MBP02144 154 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 MSMBP08118 114 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 ORM2P19652 201 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 AARDQ4LEZ3 155 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-205ENST00000439958 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 OR7C2O60412 319 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 CD69Q07108 199 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 SPATA31B1PQ5VZV4 182 aa12.03□□□□□ -0.48
CPSF7-205ENST00000439958 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-205ENST00000439958 ITPR3Q14573 2671 aa12.02□□□□□ -0.48
CPSF7-205ENST00000439958 ZNF90Q03938 601 aa12.02□□□□□ -0.48
CPSF7-205ENST00000439958 RPUSD4Q96CM3 377 aaKnown RBP12.02□□□□□ -0.48
CPSF7-205ENST00000439958 WNT10AQ9GZT5 417 aa12.02□□□□□ -0.48
CPSF7-205ENST00000439958 RPS10P5Q9NQ39 176 aa12.02□□□□□ -0.48
CPSF7-205ENST00000439958 IGLC7A0M8Q6 106 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 C5orf64Q2M2E5 130 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 OR4F5Q8NH21 305 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 OR4F4Q96R69 305 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 RASL11BQ9BPW5 248 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 IGKV1OR2-108A0A075B7D4 117 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 CTXND1A0A1B0GTU2 59 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 CX3CL1P78423 397 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 CFHR4Q92496 578 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 SLC35B3Q9H1N7 401 aa12.02□□□□□ -0.49
CPSF7-205ENST00000439958 SEPSECSQ9HD40 501 aaKnown RBP12.02□□□□□ -0.49
CPSF7-205ENST00000439958 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
CPSF7-205ENST00000439958 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 NDUFS8O00217 210 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 PAGE4O60829 102 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 MT-CO2P00403 227 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 NPBWR1P48145 328 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 SMAD7O15105 426 aaKnown RBP12.01□□□□□ -0.49
CPSF7-205ENST00000439958 IFNA1P01562 189 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 OR10J4P0C629 311 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 C1orf122Q6ZSJ8 110 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 ZFHX3Q15911 3703 aa12.01□□□□□ -0.49
CPSF7-205ENST00000439958 A0A0U1RQK1 487 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 MPDU1O75352 247 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 LINC00869P0C866 280 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms