RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RPL18AQ02543 176 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TGFBR3Q03167 851 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CD164Q04900 197 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 KIAA0087Q14695 138 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GUSBP1Q15486 140 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TOMM34Q15785 309 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ARHGAP11BQ3KRB8 267 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PDZD11Q5EBL8 140 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GCSAMLQ5JQS6 135 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 C12orf73Q69YU5 71 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC25A34Q6PIV7 304 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 Q6ZRN7 208 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 RASSF6Q6ZTQ3 369 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 MBOAT2Q6ZWT7 520 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 VN1R4Q7Z5H5 301 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 HS3ST5Q8IZT8 346 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PUSL1Q8N0Z8 303 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 MORN4Q8NDC4 146 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GPR32P1Q8NGA4 272 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR4F15Q8NGB8 312 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR4E2Q8NGC2 313 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR10G2Q8NGC3 310 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR4X2Q8NGF9 303 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR6Q1Q8NGQ2 317 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2G3Q8NGZ4 309 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2G2Q8NGZ5 317 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR5B3Q8NH48 314 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR51Q1Q8NH59 317 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZFAND1Q8TCF1 268 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 DYNC2LI1Q8TCX1 351 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF675Q8TD23 568 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 RNASEH2CQ8TDP1 164 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 LCN9Q8WX39 176 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 S100ZQ8WXG8 99 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TMEM54Q969K7 222 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 C12orf43Q96C57 262 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SEH1LQ96EE3 360 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR5B12Q96R08 314 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SDF2Q99470 211 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 P2RX4Q99571 388 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SPIN2AQ99865 258 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SPIN2BQ9BPZ2 258 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF2Q9BSG1 426 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TAPBPLQ9BX59 468 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 NAA50Q9GZZ1 169 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 NMNAT1Q9HAN9 279 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ACOT13Q9NPJ3 140 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CCL28Q9NRJ3 127 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TAC3Q9UHF0 121 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ANGPT4Q9Y264 503 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAM32AQ9Y421 112 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGLV11-55A0A075B6I3 123 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGLV3-12A0A075B6K2 115 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGKV1D-8A0A087WSZ0 117 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A087WUU8 490 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGHV2OR16-5A0A0B4J2B6 119 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A0J9YY10 115 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRDV1A0A1B0GX56 115 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAPPC13A5PLN9 417 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 NCBP2LA6PVI3 153 aaKnown RBP1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 C5orf58C9J3I9 102 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 CLDN25C9JDP6 229 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 H0Y980 276 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 H0YGG7 62 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 LY6LH3BQJ8 138 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 J3QRE1 110 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 CCRL2O00421 344 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SSNA1O43805 119 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC16A7O60669 478 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SULT1C4O75897 302 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC22A5O76082 557 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 GADD45GO95257 159 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 UTS2O95399 124 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB3DO95716 219 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB36O95755 333 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 AIFM1O95831 613 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 RLN2P04090 185 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 HMGN2P05204 90 aaKnown RBP1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 BCHEP06276 602 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 DBIP07108 87 aaKnown RBP1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 MRPL3P09001 348 aaKnown RBP1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 TSPAN19P0C672 248 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC35G6P0C7Q6 338 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 LIMS3P0CW19 117 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 LIMS4P0CW20 117 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 RD3LP0DJH9 198 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 CPMP14384 443 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 CBR1P16152 277 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 UGT2B7P16662 529 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 CELP19835 753 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC2A5P22732 501 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 RBM34P42696 430 aaKnown RBP1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SSR2P43308 183 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 PPICP45877 212 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 OMPP47874 163 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR1E2P47887 323 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 GABRA4P48169 554 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 SERPINB10P48595 397 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB38P57729 211 aa1.3□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR10A3P58181 314 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms