RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 MISP3Q96FF7 219 aa9.85□□□□□ -0.83
LINC00028-201ENST00000435497 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
LINC00028-201ENST00000435497 RNF167Q9H6Y7 350 aa9.85□□□□□ -0.83
LINC00028-201ENST00000435497 PRNDQ9UKY0 176 aa9.85□□□□□ -0.83
LINC00028-201ENST00000435497 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 ELOA3CA0A087WX78 387 aaPredicted RBP9.84□□□□□ -0.83
LINC00028-201ENST00000435497 A0A0A6YYH2 397 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 A6NJ64 397 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 ATP6V1G2O95670 118 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 MT-CO2P00403 227 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 HERV-K104P61576 105 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 MXD1Q05195 221 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 Q6ZTC4 211 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 MOB3AQ96BX8 217 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 ZNF2Q9BSG1 426 aaPredicted RBP9.84□□□□□ -0.83
LINC00028-201ENST00000435497 FKBP11Q9NYL4 201 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 EHFQ9NZC4 300 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 X6R8D5 127 aa9.84□□□□□ -0.83
LINC00028-201ENST00000435497 ZNF705EA8MWA4 302 aaPredicted RBP9.83□□□□□ -0.84
LINC00028-201ENST00000435497 DNASE2O00115 360 aaPredicted RBP9.83□□□□□ -0.84
LINC00028-201ENST00000435497 ST8SIA3O43173 380 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 CD5P06127 495 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 CBX5P45973 191 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 SCAND1P57086 179 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 IDNKQ5T6J7 187 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 DUSP18Q8NEJ0 188 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 BORCS5Q969J3 196 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 DIABLOQ9NR28 239 aa9.83□□□□□ -0.84
LINC00028-201ENST00000435497 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 RTL8CO15255 209 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 GNG7O60262 68 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 IGKV1-39P01597 117 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 IGKV1D-39P04432 117 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 TRPT1Q86TN4 253 aaKnown RBP9.82□□□□□ -0.84
LINC00028-201ENST00000435497 STHQ8IWL8 128 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 SEC22AQ96IW7 307 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 GINS3Q9BRX5 216 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 ANAPC10Q9UM13 185 aa9.82□□□□□ -0.84
LINC00028-201ENST00000435497 A0A1B0GU03 582 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 GPR31O00270 319 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 PMP2P02689 132 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 EIF4EP06730 217 aaKnown RBP9.81□□□□□ -0.84
LINC00028-201ENST00000435497 MIFP14174 115 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 C4BPBP20851 252 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 CSNK1G2-AS1Q8NCQ2 148 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 PINX1Q96BK5 328 aaKnown RBP9.81□□□□□ -0.84
LINC00028-201ENST00000435497 TSC22D3Q99576 134 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 RNF126Q9BV68 326 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 CELA1Q9UNI1 258 aa9.81□□□□□ -0.84
LINC00028-201ENST00000435497 PUS1Q9Y606 427 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00028-201ENST00000435497 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 K7EQG2 157 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 TMEM50AO95807 157 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 NAT1P18440 290 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 HSPE1P61604 102 aaKnown RBP9.8□□□□□ -0.84
LINC00028-201ENST00000435497 RPL11P62913 178 aaKnown RBP9.8□□□□□ -0.84
LINC00028-201ENST00000435497 PRCDQ00LT1 54 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 PVRIGQ6DKI7 326 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 ZNF600Q6ZNG1 722 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 LYSMD2Q8IV50 215 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 CMTM1Q8IZ96 169 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 TSPAN14Q8NG11 270 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 SCRT1Q9BWW7 348 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 KRTAP4-5Q9BYR2 181 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 IFT46Q9NQC8 304 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 RABAC1Q9UI14 185 aa9.8□□□□□ -0.84
LINC00028-201ENST00000435497 LOC100506127A0A0U1RQW1 187 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 M0R2N4 97 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 PHLDA2Q53GA4 152 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 MORN3Q6PF18 240 aaPredicted RBP9.79□□□□□ -0.84
LINC00028-201ENST00000435497 ZNF767PQ75MW2 155 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 OR4A16Q8NH70 328 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 FAM212BQ9NTI7 297 aaPredicted RBP9.79□□□□□ -0.84
LINC00028-201ENST00000435497 CLEC5AQ9NY25 188 aa9.79□□□□□ -0.84
LINC00028-201ENST00000435497 SPP1P10451 314 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 NPBWR1P48145 328 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 ERHP84090 104 aaKnown RBP9.78□□□□□ -0.84
LINC00028-201ENST00000435497 NEDD8Q15843 81 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 TMEM41BQ5BJD5 291 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 SPINK9Q5DT21 86 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 H2BFWTQ7Z2G1 175 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 OR5H2Q8NGV7 314 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 OR6F1Q8NGZ6 308 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 DCANP1Q8TF63 244 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 GRAMD2BQ96HH9 432 aa9.78□□□□□ -0.84
LINC00028-201ENST00000435497 MRPL36Q9P0J6 103 aaKnown RBP9.78□□□□□ -0.84
LINC00028-201ENST00000435497 HSPG2P98160 4391 aa9.77□□□□□ -0.84
LINC00028-201ENST00000435497 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
LINC00028-201ENST00000435497 AMBPP02760 352 aa9.77□□□□□ -0.85
LINC00028-201ENST00000435497 ZNF688P0C7X2 276 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms