RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ADAP1O75689 374 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 MFAP2P55001 183 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 SYNJ2BPP57105 145 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 IFITM3Q01628 133 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 SAMD5Q5TGI4 173 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 PLET1Q6UQ28 207 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 VN1R17PQ8TDU5 208 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 CCDC140Q96MF4 163 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 SEC22CQ9BRL7 303 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 ELOVL1Q9BW60 279 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
TREX1-201ENST00000433541 NOTCH1P46531 2555 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 OR2T8A6NH00 312 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 CORTO00230 105 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 BMPR1BO00238 502 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 WRBO00258 174 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 IFNA10P01566 189 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 CLEC3BP05452 202 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 HTR2BP41595 481 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 DTD1Q8TEA8 209 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 RBKSQ9H477 322 aa11.93□□□□□ -0.5
TREX1-201ENST00000433541 PAIP2BQ9ULR5 123 aaKnown RBP11.93□□□□□ -0.5
TREX1-201ENST00000433541 CMYA5Q8N3K9 4069 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 ZNF320A2RRD8 509 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 FAM25EA8MYX2 175 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 MED6O75586 246 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 SCGB1D2O95969 90 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 MT-CO2P00403 227 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 RNASE2P10153 161 aaKnown RBP11.92□□□□□ -0.5
TREX1-201ENST00000433541 OPRK1P41145 380 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 DEFA6Q01524 100 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 ACSM6Q6P461 480 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 NRARPQ7Z6K4 114 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 ZNF431Q8TF32 576 aaPredicted RBP11.92□□□□□ -0.5
TREX1-201ENST00000433541 SCARB1Q8WTV0 552 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
TREX1-201ENST00000433541 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
TREX1-201ENST00000433541 IGHV3-35A0A0C4DH35 117 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 INS-IGF2F8WCM5 200 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 K7EIM0 57 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 OR2C1O95371 312 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 IAPPP10997 89 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 SLC25A6P12236 298 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 NPY1RP25929 384 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 MFAP4P55083 255 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 NOXA1Q86UR1 476 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 MITD1Q8WV92 249 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 GAR1Q9NY12 217 aaKnown RBP11.91□□□□□ -0.5
TREX1-201ENST00000433541 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
TREX1-201ENST00000433541 C5orf51A6NDU8 294 aa11.9□□□□□ -0.5
TREX1-201ENST00000433541 CCSO14618 274 aa11.9□□□□□ -0.5
TREX1-201ENST00000433541 GNG7O60262 68 aa11.9□□□□□ -0.5
TREX1-201ENST00000433541 KLF5Q13887 457 aaPredicted RBP11.9□□□□□ -0.5
TREX1-201ENST00000433541 IAH1Q2TAA2 248 aaPredicted RBP11.9□□□□□ -0.5
TREX1-201ENST00000433541 BEAN1Q3B7T3 259 aa11.9□□□□□ -0.5
TREX1-201ENST00000433541 PDLIM3Q53GG5 364 aaPredicted RBP11.9□□□□□ -0.5
TREX1-201ENST00000433541 C12orf45Q8N5I9 185 aaPredicted RBP11.9□□□□□ -0.5
TREX1-201ENST00000433541 DUSP18Q8NEJ0 188 aa11.9□□□□□ -0.5
TREX1-201ENST00000433541 OR9G4Q8NGQ1 327 aa11.9□□□□□ -0.5
TREX1-201ENST00000433541 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
TREX1-201ENST00000433541 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
TREX1-201ENST00000433541 RPS10-NUDT3A0A1W2PQS6 291 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 MPTX1A8MV57 137 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 FAM90A26D6RGX4 464 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 INMT-MINDY4F8WBC2 141 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
TREX1-201ENST00000433541 TGOLN2O43493 480 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 SCGB2A1O75556 95 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 LY86O95711 162 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 PRB2P02812 416 aaPredicted RBP11.89□□□□□ -0.51
TREX1-201ENST00000433541 IFNA4P05014 189 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
TREX1-201ENST00000433541 INSL3P51460 131 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 CIB3Q96Q77 187 aaPredicted RBP11.89□□□□□ -0.51
TREX1-201ENST00000433541 U3KQ87 197 aa11.89□□□□□ -0.51
TREX1-201ENST00000433541 I3L2K1 104 aa11.88□□□□□ -0.51
TREX1-201ENST00000433541 SYNGR2O43760 224 aa11.88□□□□□ -0.51
TREX1-201ENST00000433541 NPBWR1P48145 328 aa11.88□□□□□ -0.51
TREX1-201ENST00000433541 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
TREX1-201ENST00000433541 C2orf83Q53S99 150 aa11.88□□□□□ -0.51
TREX1-201ENST00000433541 DYNLRB2Q8TF09 96 aa11.88□□□□□ -0.51
TREX1-201ENST00000433541 SSSCA1O60232 199 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 PRAF2O60831 178 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 PITX3O75364 302 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 YIF1AO95070 293 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 RAB11AP62491 216 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms