RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SLC39A9Q9NUM3 307 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 GREB1Q4ZG55 1949 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 NCOA1Q15788 1441 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 MYH11P35749 1972 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 LAMB2P55268 1798 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 TOPBP1Q92547 1522 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 PCDH15Q96QU1 1955 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.6□□□□□ -2.31
CDC40-204ENST00000431461 C7orf71A4D174 169 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 PIRO00625 290 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 RPP14O95059 124 aaKnown RBP0.6□□□□□ -2.31
CDC40-204ENST00000431461 TTRP02766 147 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 MIFP14174 115 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 ANP32AP39687 249 aaKnown RBP0.6□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H3AP68431 136 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 H3F3AP84243 136 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 RUNX1Q01196 453 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 RHEBQ15382 184 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 SPA17Q15506 151 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 Q8N2B8 174 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 ZNF565Q8N9K5 539 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 PFN4Q8NHR9 129 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 TEX47Q8TBZ9 253 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 AQP3Q92482 292 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 CCDC90BQ9GZT6 254 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 XPNPEP1Q9NQW7 623 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 FBXL12Q9NXK8 326 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 TAS2R4Q9NYW5 299 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 NOSIPQ9Y314 301 aaKnown RBP0.6□□□□□ -2.31
CDC40-204ENST00000431461 TTC21AQ8NDW8 1320 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 SNAPC4Q5SXM2 1469 aa0.6□□□□□ -2.31
CDC40-204ENST00000431461 FLG2Q5D862 2391 aaPredicted RBP0.6□□□□□ -2.31
CDC40-204ENST00000431461 KIF13BQ9NQT8 1826 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 SETD5Q9C0A6 1442 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 LOC110117498A0A087WWA1 95 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 DPRXA6NFQ7 191 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 EVPLLA8MZ36 301 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 INMT-MINDY4F8WBC2 141 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 TRAPPC2LH3BP13 241 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 HCRTO43612 131 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 NIPSNAP2O75323 286 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 CRYZL1O95825 349 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 RAB4BP61018 213 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 SUPT4H1P63272 117 aaKnown RBP0.59□□□□□ -2.31
CDC40-204ENST00000431461 RHOGP84095 191 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 PDE6HQ13956 83 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 EDDM3AQ14507 147 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 SURF2Q15527 256 aaPredicted RBP0.59□□□□□ -2.31
CDC40-204ENST00000431461 KCNJ8Q15842 424 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 IAH1Q2TAA2 248 aaPredicted RBP0.59□□□□□ -2.31
CDC40-204ENST00000431461 KHDC3LQ587J8 217 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 CDKL4Q5MAI5 379 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 KRT222Q8N1A0 295 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 HIST3H2BBQ8N257 126 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 FAM19A2Q8N3H0 131 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 ANKRD29Q8N6D5 301 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 OR2T4Q8NH00 348 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 ODF3Q96PU9 254 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 REG4Q9BYZ8 158 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 TRIM4Q9C037 500 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 RASL12Q9NYN1 266 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 KLK9Q9UKQ9 250 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 EPDR1Q9UM22 224 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 HS3ST2Q9Y278 367 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 SLC35A3Q9Y2D2 325 aa0.59□□□□□ -2.31
CDC40-204ENST00000431461 HELZ2Q9BYK8 2649 aaKnown RBP0.59□□□□□ -2.32
CDC40-204ENST00000431461 BRWD1Q9NSI6 2320 aa0.59□□□□□ -2.32
CDC40-204ENST00000431461 RTL1A6NKG5 1358 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 GLI3P10071 1580 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.58□□□□□ -2.32
CDC40-204ENST00000431461 IGKV1-9A0A0C4DH69 117 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 EXOC1LA0A1B0GW35 172 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 TMEM212A6NML5 194 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 M0R2N4 97 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 UBL3O95164 117 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 ASAH2BP0C7U1 165 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 SMIM10L2AP0DMW4 78 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 SMIM10L2BP0DMW5 78 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 DEFA4P12838 97 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 PPIBP23284 216 aaKnown RBP0.58□□□□□ -2.32
CDC40-204ENST00000431461 ZNF846Q147U1 533 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 OOSP2Q86WS3 158 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 MNS1Q8NEH6 495 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 TERB2Q8NHR7 220 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 CT55Q8WUE5 264 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 H1FXQ92522 213 aaKnown RBP0.58□□□□□ -2.32
CDC40-204ENST00000431461 TSPAN32Q96QS1 320 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 SLC50A1Q9BRV3 221 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 DCSTAMPQ9H295 470 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 CISHQ9NSE2 258 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 CYSLTR1Q9Y271 337 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 ERGIC3Q9Y282 383 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 NUMA1Q14980 2115 aa0.58□□□□□ -2.32
CDC40-204ENST00000431461 KMT2BQ9UMN6 2715 aaPredicted RBP0.58□□□□□ -2.32
CDC40-204ENST00000431461 RALGAPA2Q2PPJ7 1873 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 OR4C46A6NHA9 309 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 CLDN24A6NM45 220 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 KPNA3O00505 521 aaPredicted RBP0.57□□□□□ -2.32
CDC40-204ENST00000431461 SULT1B1O43704 296 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 OR1I1O60431 355 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms