RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	MT-CO2	P00403	227 aa		13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	UCP1	P25874	307 aa		13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	PPP5C	P53041	499 aa		13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	ERH	P84090	104 aa	Known RBP	13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	REL	Q04864	619 aa	Predicted RBP	13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	SPCS2	Q15005	226 aa		13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	LAMTOR1	Q6IAA8	161 aa		13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	ZFAND1	Q8TCF1	268 aa		13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	NXF2	Q9GZY0	626 aa	Known RBP	13.18	□□□□□ -0.3
MRPL28-203	ENST00000429738	ZNF207	O43670	478 aa	Known RBP	13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	RAB3D	O95716	219 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	MRPS10	P82664	201 aa	Known RBP	13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	ODF3L2	Q3SX64	289 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	PVRIG	Q6DKI7	326 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	STEAP1B	Q6NZ63	245 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	OR13C8	Q8NGS7	320 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	OVOL2	Q9BRP0	275 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	COPZ2	Q9P299	210 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	SMPX	Q9UHP9	88 aa		13.17	□□□□□ -0.3
MRPL28-203	ENST00000429738	RGS5	O15539	181 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	ST8SIA3	O43173	380 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	B3GALNT1	O75752	331 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	ATG12	O94817	140 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	CTSD	P07339	412 aa	Predicted RBP	13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	AKR1C2	P52895	323 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	SP6	Q3SY56	376 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	SPINK9	Q5DT21	86 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	CCDC71L	Q8N9Z2	235 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	SMIM4	Q8WVI0	70 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738	LINC00476	Q8WZB0	136 aa		13.16	□□□□□ -0.3
MRPL28-203	ENST00000429738		A0A0G2JRQ6	117 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	IGHV7-4-1	A0A0J9YVY3	117 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	CHEK1	O14757	476 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	IGHV3-48	P01763	117 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	SCGB2B2	Q4G0G5	96 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	MARCH1	Q8TCQ1	289 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	PINX1	Q96BK5	328 aa	Known RBP	13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	RNF2	Q99496	336 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	UBQLN2	Q9UHD9	624 aa		13.15	□□□□□ -0.3
MRPL28-203	ENST00000429738	CTDSPL	O15194	276 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	GNG7	O60262	68 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	MEF2D	Q14814	521 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	TRIM16L	Q309B1	348 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	AARD	Q4LEZ3	155 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	FAAP20	Q6NZ36	180 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	WFDC3	Q8IUB2	231 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	SLC35G3	Q8N808	338 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	DYNC2LI1	Q8TCX1	351 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	RAB2B	Q8WUD1	216 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	RHPN1-AS1	Q9BWJ2	59 aa		13.14	□□□□□ -0.31
MRPL28-203	ENST00000429738	OR4C46	A6NHA9	309 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	CDS2	O95674	445 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	RNASE2	P10153	161 aa	Known RBP	13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	SNCA	P37840	140 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	SURF2	Q15527	256 aa	Predicted RBP	13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	FAM90A2P	Q658T7	463 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738		Q6ZRM9	215 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738		Q6ZWC4	215 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	TMEM116	Q8NCL8	245 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	BCL7B	Q9BQE9	202 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	TMEM222	Q9H0R3	208 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	CCDC59	Q9P031	241 aa	Known RBP	13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	TP53TG1	Q9Y2A0	90 aa		13.13	□□□□□ -0.31
MRPL28-203	ENST00000429738	KMT2A	Q03164	3969 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	TRAV14DV4	A0A0A6YYC5	116 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	CORT	O00230	105 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	YIF1A	O95070	293 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	LY6G6C	O95867	125 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	IFNA17	P01571	189 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	OR5AC1	P0C628	307 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	ETV6	P41212	452 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	NPBWR1	P48145	328 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	APOC4	P55056	127 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	TMBIM6	P55061	237 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	BSX	Q3C1V8	233 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	TOMM20L	Q6UXN7	152 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	FAM219A	Q8IW50	185 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	DUSP18	Q8NEJ0	188 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	LHFPL5	Q8TAF8	219 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	GLYATL2	Q8WU03	294 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	RRNAD1	Q96FB5	475 aa	Known RBP	13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	PDCD10	Q9BUL8	212 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	ZFAND3	Q9H8U3	227 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	RABL2B	Q9UNT1	228 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	GPR132	Q9UNW8	380 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	HERC2	O95714	4834 aa		13.12	□□□□□ -0.31
MRPL28-203	ENST00000429738	KIR2DL5B	A0A0G2JN68	375 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	KIR2DL5B	A0A0G2JPC4	375 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	UBE2C	O00762	179 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	TMEM50A	O95807	157 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	AKAIN1	P0CW23	69 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	KIR2DL5A	Q8N109	375 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	OR4C16	Q8NGL9	310 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	KIR2DL5B	Q8NHK3	375 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	DIRAS2	Q96HU8	199 aa		13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.11	□□□□□ -0.31
MRPL28-203	ENST00000429738	VSIR	Q9H7M9	311 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms