RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 LINC00482Q8N8I6 264 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 OR1P1Q8NH06 330 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 CLEC3BP05452 202 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 RPEL1Q2QD12 228 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 IAH1Q2TAA2 248 aaPredicted RBP11.23□□□□□ -0.61
SGCE-204ENST00000428696 Q56UQ5 140 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 DCUN1D4Q92564 292 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 HSPB7Q9UBY9 170 aa11.23□□□□□ -0.61
SGCE-204ENST00000428696 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 WRBO00258 174 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 MED6O75586 246 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 OR2C1O95371 312 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 IL5P05113 134 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 ZP3P21754 424 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
SGCE-204ENST00000428696 GPR183P32249 361 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 ARL3P36405 182 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 HTR2BP41595 481 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 TATDN3Q17R31 274 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 OXLD1Q5BKU9 147 aa11.22□□□□□ -0.61
SGCE-204ENST00000428696 DLX4Q92988 240 aaPredicted RBP11.22□□□□□ -0.61
SGCE-204ENST00000428696 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
SGCE-204ENST00000428696 IGHV3-35A0A0C4DH35 117 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 OR2T8A6NH00 312 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 MT-CO2P00403 227 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 RNASE2P10153 161 aaKnown RBP11.21□□□□□ -0.61
SGCE-204ENST00000428696 SLC25A6P12236 298 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 SYNJ2BPP57105 145 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 DCTN2Q13561 401 aaKnown RBP11.21□□□□□ -0.61
SGCE-204ENST00000428696 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 VN1R17PQ8TDU5 208 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 SCARB1Q8WTV0 552 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 OR10C1Q96KK4 312 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 MARVELD1Q9BSK0 173 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 C21orf62Q9NYP8 219 aa11.21□□□□□ -0.61
SGCE-204ENST00000428696 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.62
SGCE-204ENST00000428696 ZNF320A2RRD8 509 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 G3V4G9 280 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 OVOL1O14753 267 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 SSNA1O43805 119 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 GGCTO75223 188 aaKnown RBP11.2□□□□□ -0.62
SGCE-204ENST00000428696 PITX3O75364 302 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 IFNA4P05014 189 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 OPRK1P41145 380 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
SGCE-204ENST00000428696 MLANAQ16655 118 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
SGCE-204ENST00000428696 K7EIM0 57 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 BMPR1BO00238 502 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 SYNGR2O43760 224 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 PRAF2O60831 178 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 NPY1RP25929 384 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 MFAP4P55083 255 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 POLR2GP62487 172 aaKnown RBP eCLIP11.19□□□□□ -0.62
SGCE-204ENST00000428696 FHL3Q13643 280 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 PDLIM3Q53GG5 364 aaPredicted RBP11.19□□□□□ -0.62
SGCE-204ENST00000428696 GSG1LQ6UXU4 331 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 ZBTB8BQ8NAP8 495 aaPredicted RBP11.19□□□□□ -0.62
SGCE-204ENST00000428696 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
SGCE-204ENST00000428696 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 INS-IGF2F8WCM5 200 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 I3L2K1 104 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 GOSR2O14653 212 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 SSSCA1O60232 199 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 PTTG1O95997 202 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 RGS21Q2M5E4 152 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 FAM209BQ5JX69 171 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 SPANXN5Q5MJ07 72 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 NOXA1Q86UR1 476 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 ZNF502Q8TBZ5 544 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 RCC1LQ96I51 464 aaKnown RBP11.18□□□□□ -0.62
SGCE-204ENST00000428696 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
SGCE-204ENST00000428696 PALMDQ9NP74 551 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 U3KQ87 197 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 SNRPGP15A8MWD9 76 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 H3BP45 60 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 CORTO00230 105 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 GNG7O60262 68 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 SAP30O75446 220 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 SIX6O95475 246 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 RPP30P78346 268 aaKnown RBP11.18□□□□□ -0.62
SGCE-204ENST00000428696 C2orf83Q53S99 150 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 OR4D5Q8NGN0 318 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
SGCE-204ENST00000428696 OR4C12Q96R67 309 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 ELOVL1Q9BW60 279 aa11.18□□□□□ -0.62
SGCE-204ENST00000428696 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 NUPL2O15504 423 aaKnown RBP11.17□□□□□ -0.62
SGCE-204ENST00000428696 YIF1AO95070 293 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 RAB11AP62491 216 aa11.17□□□□□ -0.62
SGCE-204ENST00000428696 ID3Q02535 119 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms