RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 RNF182Q8N6D2 247 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 C11orf44Q8N8P7 122 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 SDHCQ99643 169 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-208ENST00000428599 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 C12orf77C9JDV5 145 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 TGFBR3LH3BV60 316 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 ZNF708P17019 499 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 CKS1BP61024 79 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 FAM89BQ8N5H3 189 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 GLMPQ8WWB7 406 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 CACNG8Q8WXS5 425 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 SIRT4Q9Y6E7 314 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-208ENST00000428599 FAM186AA6NE01 2351 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 RP1P56715 2156 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 GRIFINA4D1Z8 144 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 NDUFA3O95167 84 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 PVRIGQ6DKI7 326 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 FAM201AQ5SY85 155 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 OTORQ9NRC9 128 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 F12P00748 615 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-208ENST00000428599 TYMSP04818 313 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 IGFBP2P18065 325 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 RND3P61587 244 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 LY6DQ14210 128 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 C3orf56Q8N813 242 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 Q9H3A6 140 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 ANK1P16157 1881 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 RLFQ13129 1914 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 NPIPB13A6NJU9 1138 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 E9PLN8 166 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 H0YL77 283 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 FHITP49789 147 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 PAX2Q02962 417 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 MRPL14Q6P1L8 145 aaKnown RBP7.51□□□□□ -1.21
CTNND1-208ENST00000428599 VKORC1Q9BQB6 163 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 PEF1Q9UBV8 284 aaKnown RBP7.51□□□□□ -1.21
CTNND1-208ENST00000428599 FABP5P3A8MUU1 101 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 VENTXO95231 258 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 UMODP07911 640 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
CTNND1-208ENST00000428599 NYNRINQ9P2P1 1898 aaKnown RBP7.51□□□□□ -1.21
CTNND1-208ENST00000428599 MGAMO43451 1857 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 KLF4O43474 513 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 CD28P10747 220 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 CD59P13987 128 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 IGHV1-2P23083 117 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 ASPHD2Q6ICH7 369 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 ZNF600Q6ZNG1 722 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 MUC21A0A0G2JKD1 596 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 A0A0G2JMM0 328 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 MUC21A0A140T8X8 626 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 A0A1W2PPB8 328 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 A0A1W2PRS3 328 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 KIR3DP1A8MWS1 328 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 HLA-DQB1P01920 261 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 RHOGP84095 191 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 ZNF585BQ52M93 769 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 TRAV40A0A0B4J280 105 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 CGAP01215 116 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-208ENST00000428599 RBM38Q9H0Z9 239 aaKnown RBP7.5□□□□□ -1.21
CTNND1-208ENST00000428599 C5orf66Q9H5L9 145 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 JPT2Q9H910 190 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 CACNA1IQ9P0X4 2223 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 IQCF6A8MYZ5 107 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 APOMO95445 188 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 CD5P06127 495 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 EGR4Q05215 589 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 TMEM133Q9H2Q1 129 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 THADAQ6YHU6 1953 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 ZSWIM8A7E2V4 1837 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 A0A1B0GWB2 263 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 OVOL1O14753 267 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 CXCL2P19875 107 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 ZP1P60852 638 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 IMMP1LQ96LU5 166 aa7.5□□□□□ -1.21
CTNND1-208ENST00000428599 TRAV12-3A0A0B4J271 114 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 C20orf204Q6ZNR8 217 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 CEACAM8P31997 349 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-208ENST00000428599 SPACA3Q8IXA5 215 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 C9orf106Q8NAJ2 232 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 WDYHV1Q96HA8 205 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 NAPSAO96009 420 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 DANCRP0C864 163 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 LINC00158P58513 81 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 PAX8Q06710 450 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 ZFP36L1Q07352 338 aaKnown RBP7.49□□□□□ -1.21
CTNND1-208ENST00000428599 SRSF1Q07955 248 aaKnown RBP eCLIP7.49□□□□□ -1.211e-7■□□□□ 10.7
CTNND1-208ENST00000428599 SEPSECSQ9HD40 501 aaKnown RBP7.49□□□□□ -1.21
CTNND1-208ENST00000428599 IL36BQ9NZH7 164 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 RNF114Q9Y508 228 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 GGTLC3B5MD39 225 aa7.49□□□□□ -1.21
CTNND1-208ENST00000428599 MRPS18CQ9Y3D5 142 aaKnown RBP7.49□□□□□ -1.21
CTNND1-208ENST00000428599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-208ENST00000428599 CYSLTR1Q9Y271 337 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 DPRXA6NFQ7 191 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms