RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 RAB11AP62491 216 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 ECSCRQ19T08 205 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 TMEM95Q3KNT9 176 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 ETV3LQ6ZN32 361 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 STX12Q86Y82 276 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 RNASEH2CQ8TDP1 164 aaKnown RBP9.79□□□□□ -0.84
TRIM39-207ENST00000428404 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 LINC00527Q9UJ94 153 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 TRBV9A0A0B4J1U6 114 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 SCAF4O95104 1147 aaKnown RBP9.78□□□□□ -0.84
TRIM39-207ENST00000428404 IGLV1-40P01703 118 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 IFNA4P05014 189 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 S100A11P31949 105 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 GPX4P36969 197 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-207ENST00000428404 AP2S1P53680 142 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-207ENST00000428404 TMUB2Q71RG4 321 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 TMEM217Q8N7C4 229 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 GGACTQ9BVM4 153 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 WFDC1Q9HC57 220 aa9.78□□□□□ -0.84
TRIM39-207ENST00000428404 SETD2Q9BYW2 2564 aaPredicted RBP9.77□□□□□ -0.84
TRIM39-207ENST00000428404 I3L2K1 104 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 NDUFA7O95182 113 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 PRH1P02810 166 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 DEFA4P12838 97 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 HBG1P69891 147 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 HBG2P69892 147 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 DLK1P80370 383 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 SLC38A11Q08AI6 406 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 OR8G2PQ6IF36 304 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 SLC25A24Q6NUK1 477 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 OR1S2Q8NGQ3 325 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 OR5C1Q8NGR4 320 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 TAF15Q92804 592 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRIM39-207ENST00000428404 PINX1Q96BK5 328 aaKnown RBP9.77□□□□□ -0.85
TRIM39-207ENST00000428404 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-207ENST00000428404 ZC4H2Q9NQZ6 224 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 FBXL17Q9UF56 701 aa9.77□□□□□ -0.85
TRIM39-207ENST00000428404 PAIP2BQ9ULR5 123 aaKnown RBP9.77□□□□□ -0.85
TRIM39-207ENST00000428404 TMEM89A2RUT3 159 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 FNDC10F2Z333 226 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 H3BUA1 57 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 K7EIM0 57 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 CORTO00230 105 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 TAAR5O14804 337 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 IGHG4P01861 327 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 CRYBA1P05813 215 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
TRIM39-207ENST00000428404 CD69Q07108 199 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 EXOSC2Q13868 293 aaKnown RBP9.76□□□□□ -0.85
TRIM39-207ENST00000428404 MLANAQ16655 118 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 ATP6V1FQ16864 119 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 ARSJQ5FYB0 599 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-207ENST00000428404 OR2T6Q8NHC8 308 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 WIPF2Q8TF74 440 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-207ENST00000428404 GON7Q9BXV9 100 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 ARL6Q9H0F7 186 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 BOLA1Q9Y3E2 137 aa9.76□□□□□ -0.85
TRIM39-207ENST00000428404 CYB5BO43169 146 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 BCL2L11O43521 198 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 NDUFB8O95169 186 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 MDKP21741 143 aaPredicted RBP9.75□□□□□ -0.85
TRIM39-207ENST00000428404 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 NECAP1Q8NC96 275 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 LINC01006Q8NI28 216 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 ATP5SQ99766 215 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 SMIM3Q9BZL3 60 aa9.75□□□□□ -0.85
TRIM39-207ENST00000428404 DFFBO76075 338 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 MT-CO2P00403 227 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 PSMB8P28062 276 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 RHOGP84095 191 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 KIAA0141Q14154 515 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-207ENST00000428404 GAMTQ14353 236 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 CLINT1Q14677 625 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 OPCMLQ14982 345 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 ETFRF1Q6IPR1 90 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 ZNF329Q86UD4 541 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 VN1R17PQ8TDU5 208 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 UQCC1Q9NVA1 299 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 THYN1Q9P016 225 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 MRPL36Q9P0J6 103 aaKnown RBP9.74□□□□□ -0.85
TRIM39-207ENST00000428404 FBXL7Q9UJT9 491 aa9.74□□□□□ -0.85
TRIM39-207ENST00000428404 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 KANTRA0A1W2PQU2 76 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 PSMB11A5LHX3 300 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 FAM223BA6NKX1 122 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 OR2J3O76001 311 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 C4BPBP20851 252 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 OPRK1P41145 380 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms