RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 OR4A5Q8NH83 315 aa12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 MYOZ3Q8TDC0 251 aa12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 RBPMSQ93062 196 aaKnown RBP12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 RAX2Q96IS3 184 aa12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 ZNF471Q9BX82 626 aaPredicted RBP12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 ZNF355PQ9NSJ1 428 aa12.19□□□□□ -0.46
CLK3P2-201ENST00000427566 ANKRD34BA5PLL1 514 aa12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 TAAR5O14804 337 aa12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 OR2B8PP59922 312 aa12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 WFDC9Q8NEX5 89 aa12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 MED9Q9NWA0 146 aa12.18□□□□□ -0.46
CLK3P2-201ENST00000427566 A0A0G2JRQ6 117 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 E5RGE8 158 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 RBMXL2O75526 392 aaKnown RBP12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 PRH1P02810 166 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 AREGP15514 252 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 MAS1LP35410 378 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 ZNF491Q8N8L2 437 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 OR4D5Q8NGN0 318 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 C4orf3Q8WVX3 66 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 SLC25A32Q9H2D1 315 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 GNB4Q9HAV0 340 aa12.17□□□□□ -0.46
CLK3P2-201ENST00000427566 TEX50A0A1B0GTY4 177 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 K7EPK0 472 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 ST8SIA3O43173 380 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 MBPP02686 304 aaPredicted RBP12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 REG1AP05451 166 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 P0C879 139 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 TPT1P13693 172 aaKnown RBP12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 EIF5AP63241 154 aaKnown RBP12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 H2BFWTQ7Z2G1 175 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 OR11H1Q8NG94 326 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 OR10W1Q8NGF6 305 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 P2RX4Q99571 388 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 LSM5Q9Y4Y9 91 aaKnown RBP12.16□□□□□ -0.46
CLK3P2-201ENST00000427566 SCGB1D2O95969 90 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 NMBP08949 121 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 SLC25A6P12236 298 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 TPPP2P59282 170 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 NMSQ5H8A3 153 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 THOC7Q6I9Y2 204 aaKnown RBP12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 COMMD5Q9GZQ3 224 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
CLK3P2-201ENST00000427566 IGHV3-11P01762 117 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 TRGV3P03979 118 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 P2RY1P47900 373 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 AKR1C2P52895 323 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 Q6ZRM9 215 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 BAP18Q8IXM2 172 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 CYTL1Q9NRR1 136 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 TMEM14BQ9NUH8 114 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 NOTCH1P46531 2555 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 IGLC7A0M8Q6 106 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 C15orf61A6NNL5 157 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 I3L521 148 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 HOXD3P31249 432 aaPredicted RBP12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 KPRPQ5T749 579 aaPredicted RBP12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 COMMD7Q86VX2 200 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 DPF1Q92782 380 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 CITED4Q96RK1 184 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 ZC4H2Q9NQZ6 224 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
CLK3P2-201ENST00000427566 NOTCH3Q9UM47 2321 aa12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 A0A1B0GU03 582 aa12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 FGF2P09038 288 aa12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 MCRIP2Q9BUT9 160 aaKnown RBP12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
CLK3P2-201ENST00000427566 CTRB1P17538 263 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 WT1-ASQ06250 92 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 ZNF616Q08AN1 781 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 SPINK9Q5DT21 86 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 PCNPQ8WW12 178 aaKnown RBP12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 GPR146Q96CH1 333 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 GPR61Q9BZJ8 451 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 C11orf1Q9H5F2 150 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 PFDN2Q9UHV9 154 aa12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 RCL1Q9Y2P8 373 aaKnown RBP12.12□□□□□ -0.47
CLK3P2-201ENST00000427566 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
CLK3P2-201ENST00000427566 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms