RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HIPK2Q9H2X6 1198 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 K7EIM0 57 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 HTR2BP41595 481 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 IAH1Q2TAA2 248 aaPredicted RBP18.85■□□□□ 0.61
VEGFA-209ENST00000425836 OR4D5Q8NGN0 318 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 VN1R17PQ8TDU5 208 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 MISP3Q96FF7 219 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 CCDC140Q96MF4 163 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 WNK1Q9H4A3 2382 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 IGHV3-21A0A0B4J1V1 117 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 OR8U8P0C7N1 319 aa18.85■□□□□ 0.61
VEGFA-209ENST00000425836 TRBV7-1A0A0A6YYK4 115 aa18.84■□□□□ 0.61
VEGFA-209ENST00000425836 I3L2K1 104 aa18.84■□□□□ 0.61
VEGFA-209ENST00000425836 ID3Q02535 119 aa18.84■□□□□ 0.61
VEGFA-209ENST00000425836 ZBTB8BQ8NAP8 495 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-209ENST00000425836 ZNF502Q8TBZ5 544 aa18.84■□□□□ 0.61
VEGFA-209ENST00000425836 SCARB1Q8WTV0 552 aa18.84■□□□□ 0.61
VEGFA-209ENST00000425836 MAGT1Q9H0U3 335 aa18.84■□□□□ 0.61
VEGFA-209ENST00000425836 MED6O75586 246 aa18.83■□□□□ 0.6
VEGFA-209ENST00000425836 CD33P20138 364 aa18.83■□□□□ 0.6
VEGFA-209ENST00000425836 SLURP1P55000 103 aa18.83■□□□□ 0.6
VEGFA-209ENST00000425836 FAM209BQ5JX69 171 aa18.83■□□□□ 0.6
VEGFA-209ENST00000425836 CLEC19AQ6UXS0 136 aa18.83■□□□□ 0.6
VEGFA-209ENST00000425836 SLC24A4Q8NFF2 622 aa18.83■□□□□ 0.6
VEGFA-209ENST00000425836 FAM25EA8MYX2 175 aa18.82■□□□□ 0.6
VEGFA-209ENST00000425836 RGS21Q2M5E4 152 aa18.82■□□□□ 0.6
VEGFA-209ENST00000425836 C2orf83Q53S99 150 aa18.82■□□□□ 0.6
VEGFA-209ENST00000425836 TMEM170AQ8WVE7 144 aa18.82■□□□□ 0.6
VEGFA-209ENST00000425836 PINX1Q96BK5 328 aaKnown RBP18.82■□□□□ 0.6
VEGFA-209ENST00000425836 GSKIPQ9P0R6 139 aa18.82■□□□□ 0.6
VEGFA-209ENST00000425836 U3KQ87 197 aa18.82■□□□□ 0.6
VEGFA-209ENST00000425836 BMPR1BO00238 502 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 SYNGR2O43760 224 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 MT-CO2P00403 227 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 IAPPP10997 89 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 HOXD3P31249 432 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-209ENST00000425836 NKX2-1P43699 371 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-209ENST00000425836 CMYA5Q8N3K9 4069 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 C5orf51A6NDU8 294 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 CLEC3BP05452 202 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 ZP3P21754 424 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 TATDN3Q17R31 274 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 DCUN1D4Q92564 292 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 DLX4Q92988 240 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-209ENST00000425836 C21orf62Q9NYP8 219 aa18.81■□□□□ 0.6
VEGFA-209ENST00000425836 PPP5D1E7EU14 171 aa18.8■□□□□ 0.6
VEGFA-209ENST00000425836 CORTO00230 105 aa18.8■□□□□ 0.6
VEGFA-209ENST00000425836 IFNA10P01566 189 aa18.8■□□□□ 0.6
VEGFA-209ENST00000425836 NPY1RP25929 384 aa18.8■□□□□ 0.6
VEGFA-209ENST00000425836 POLR2GP62487 172 aaKnown RBP eCLIP18.8■□□□□ 0.6
VEGFA-209ENST00000425836 C7orf66A4D0T2 115 aa18.79■□□□□ 0.6
VEGFA-209ENST00000425836 IGHV3-48P01763 117 aa18.79■□□□□ 0.6
VEGFA-209ENST00000425836 C2orf50Q96LR7 162 aa18.79■□□□□ 0.6
VEGFA-209ENST00000425836 CIB3Q96Q77 187 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-209ENST00000425836 PKD1L1Q8TDX9 2849 aa18.78■□□□□ 0.6
VEGFA-209ENST00000425836 F8W735 103 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-209ENST00000425836 WRBO00258 174 aa18.78■□□□□ 0.6
VEGFA-209ENST00000425836 GPR183P32249 361 aa18.78■□□□□ 0.6
VEGFA-209ENST00000425836 ARL3P36405 182 aa18.78■□□□□ 0.6
VEGFA-209ENST00000425836 GSG1LQ6UXU4 331 aa18.78■□□□□ 0.6
VEGFA-209ENST00000425836 FNDC4Q9H6D8 234 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-209ENST00000425836 SCGB1D2O95969 90 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 IGLL1P15814 213 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 ATP5IP56385 69 aaPredicted RBP18.77■□□□□ 0.6
VEGFA-209ENST00000425836 KLF5Q13887 457 aaPredicted RBP18.77■□□□□ 0.6
VEGFA-209ENST00000425836 OXA1LQ15070 435 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 MLANAQ16655 118 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 RPEL1Q2QD12 228 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 NOXA1Q86UR1 476 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 RNASEH2CQ8TDP1 164 aaKnown RBP18.77■□□□□ 0.6
VEGFA-209ENST00000425836 ATP6V0BQ99437 205 aa18.77■□□□□ 0.6
VEGFA-209ENST00000425836 GOSR2O14653 212 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 GGCTO75223 188 aaKnown RBP18.76■□□□□ 0.59
VEGFA-209ENST00000425836 OR2C1O95371 312 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 MBPP02686 304 aaPredicted RBP18.76■□□□□ 0.59
VEGFA-209ENST00000425836 RCC1LQ96I51 464 aaKnown RBP18.76■□□□□ 0.59
VEGFA-209ENST00000425836 ZC4H2Q9NQZ6 224 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 ALG5Q9Y673 324 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 OR2T8A6NH00 312 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 OVOL1O14753 267 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 SSNA1O43805 119 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 FCGR2BP31994 310 aaPredicted RBP18.76■□□□□ 0.59
VEGFA-209ENST00000425836 OPRK1P41145 380 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 MFAP4P55083 255 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 Q56UQ5 140 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 UBAC2Q8NBM4 344 aa18.76■□□□□ 0.59
VEGFA-209ENST00000425836 C15orf62A8K5M9 175 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 SSSCA1O60232 199 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 SIX6O95475 246 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 LY86O95711 162 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 SYNJ2BPP57105 145 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 IL15RAQ13261 267 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 BSCL2Q96G97 398 aaPredicted RBP18.75■□□□□ 0.59
VEGFA-209ENST00000425836 TXN2Q99757 166 aa18.75■□□□□ 0.59
VEGFA-209ENST00000425836 TGOLN2O43493 480 aa18.74■□□□□ 0.59
VEGFA-209ENST00000425836 TMEM50AO95807 157 aa18.74■□□□□ 0.59
VEGFA-209ENST00000425836 OXLD1Q5BKU9 147 aa18.74■□□□□ 0.59
VEGFA-209ENST00000425836 ACSM6Q6P461 480 aa18.74■□□□□ 0.59
VEGFA-209ENST00000425836 OR4C12Q96R67 309 aa18.74■□□□□ 0.59
VEGFA-209ENST00000425836 MRPL36Q9P0J6 103 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms