RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CGB3P0DN86 165 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 CGB7P0DN87 165 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 UBE2L3P68036 154 aaKnown RBP6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 CR1LQ2VPA4 569 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 TMEM136Q6ZRR5 245 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 ATOH7Q8N100 152 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 FAM168AQ92567 244 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 SGK494Q96LW2 274 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 WNT10AQ9GZT5 417 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF331Q9NQX6 463 aaPredicted RBP6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 SLC25A10Q9UBX3 287 aaPredicted RBP6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 GOLT1BQ9Y3E0 138 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 LY96Q9Y6Y9 160 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 TRAV17A0A0B4J275 112 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 NPSP0C0P6 89 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 C8orf88P0DMB2 117 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 RTL8BQ17RB0 113 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 MORN5Q5VZ52 161 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 WDR73Q6P4I2 378 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 ADTRPQ96IZ2 230 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 SFXN3Q9BWM7 321 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 COL25A1Q9BXS0 654 aaPredicted RBP6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 OSTCQ9NRP0 149 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 RNF7Q9UBF6 113 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 SPTA1P02549 2419 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 PCNX1Q96RV3 2341 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 A0A1W2PS18 150 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 PLAUP00749 431 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 ESDP10768 282 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 USF1P22415 310 aaPredicted RBP6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 TNFAIP6P98066 277 aaPredicted RBP6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 PRCDQ00LT1 54 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 DEFB109BQ30KR1 87 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 LHFPL4Q7Z7J7 247 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 TMEM68Q96MH6 324 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 TXN2Q99757 166 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 COMMD5Q9GZQ3 224 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 RAB9BQ9NP90 201 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 DKK4Q9UBT3 224 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 TRBV9A0A0B4J1U6 114 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 BMPR1BO00238 502 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 APCSP02743 223 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 SAA1P0DJI8 122 aaPredicted RBP6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 PYYP10082 97 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 CHRNB4P30926 498 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 MMDQ15546 238 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 SLC25A33Q9BSK2 321 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF355PQ9NSJ1 428 aa6.14□□□□□ -1.43
SMARCC1-202ENST00000425518 DLEU1O43261 78 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 LHBP01229 141 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 MT-ND6P03923 174 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 AMY1AP04745 511 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 WT1P19544 449 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 CFHR2P36980 270 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 COMPP49747 757 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 CAMPP49913 170 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 MFAP2P55001 183 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 SELENOVP59797 346 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 RPRMLQ8N4K4 120 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 SLC35E1Q96K37 410 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 RNF2Q99496 336 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 CDC42EP3Q9UKI2 254 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 RPH3ALQ9UNE2 315 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 OR5G3P0C626 314 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 GLRXP35754 106 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 SSBP2P81877 361 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 LCN12Q6JVE5 192 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 ZCCHC24Q8N2G6 241 aaKnown RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 BORCS7Q96B45 105 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 HARBI1Q96MB7 349 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 DNAJC4Q9NNZ3 241 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 ISLRO14498 428 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 IGLV2-8P01709 118 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 RNASE2P10153 161 aaKnown RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 GPR6P46095 362 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 PPOXP50336 477 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 CCL8P80075 99 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 ERHP84090 104 aaKnown RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 CD69Q07108 199 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 C10orf55Q5SWW7 151 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF474Q6S9Z5 364 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 KCNS1Q96KK3 526 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 MRPL20Q9BYC9 149 aaKnown RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 LPAR2Q9HBW0 351 aa6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 AMMECR1Q9Y4X0 333 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-202ENST00000425518 DSCAMO60469 2012 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 POLEQ07864 2286 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 DPRXA6NFQ7 191 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF324O75467 553 aaPredicted RBP6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 C3orf79P0CE67 100 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 Q6ZN92 141 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 SEM1Q6ZVN7 128 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 C1orf174Q8IYL3 243 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 OR4B1Q8NGF8 309 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 NPIPB3Q92617 1050 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 GAFA1Q96PS6 74 aa6.12□□□□□ -1.43
SMARCC1-202ENST00000425518 PLXNB1O43157 2135 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms