RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 MSGN1A6NI15 193 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 PPP1R3EQ9H7J1 279 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 C4orf51C9J302 202 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 CACNG7P62955 275 aa9.35□□□□□ -0.91
FN1-207ENST00000421182 TRAV14DV4A0A0A6YYC5 116 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 AGAP20933 346 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 ERVK11-1P61568 191 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 TMEM187Q14656 261 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 WDR82Q6UXN9 313 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 LINC01356Q8N9X3 169 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 PKIAP61925 76 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 ICAM4Q14773 271 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 TRGV11A0A075B6L2 103 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 ZNF600Q6ZNG1 722 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 UBE2DNLQ8IWF7 75 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 RFLNBQ8N5W9 214 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 OR4D5Q8NGN0 318 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 NEU1Q99519 415 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 A0A0G2JK05 382 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 A0A0G2JMM0 328 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 A0A1W2PP11 408 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 A0A1W2PPB8 328 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 A0A1W2PRS3 328 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 KIR3DP1A8MWS1 328 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 FABP2P12104 132 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 RPL39P5Q59GN2 51 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 SSC4DQ8WTU2 575 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 PLSCR4Q9NRQ2 329 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 CD33P20138 364 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 SRSF7Q16629 238 aaKnown RBP eCLIP9.34□□□□□ -0.911e-6■■■■□ 19.5
FN1-207ENST00000421182 ZNF497Q6ZNH5 498 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 VN1R17PQ8TDU5 208 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 A0A1W2PRX2 142 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
FN1-207ENST00000421182 SPRR3Q9UBC9 169 aa9.34□□□□□ -0.91
FN1-207ENST00000421182 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.92
FN1-207ENST00000421182 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.92
FN1-207ENST00000421182 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.92
FN1-207ENST00000421182 RBMY1A1P0DJD3 496 aaKnown RBP9.34□□□□□ -0.92
FN1-207ENST00000421182 RBMY1CP0DJD4 496 aa9.34□□□□□ -0.92
FN1-207ENST00000421182 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.92
FN1-207ENST00000421182 TRAF4Q9BUZ4 470 aaPredicted RBP9.34□□□□□ -0.92
FN1-207ENST00000421182 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
FN1-207ENST00000421182 A0A087X0M5 115 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 A0A1B0GX30 115 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 KLF4O43474 513 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 CNTFRP26992 372 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 USMG5Q96IX5 58 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 AMELYQ99218 206 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 OR5AC2Q9NZP5 309 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 C12orf77C9JDV5 145 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
FN1-207ENST00000421182 SOD3P08294 240 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 C11orf91Q3C1V1 193 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 RNF5Q99942 180 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 C9JCJ5 164 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 GCHFRP30047 84 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 CDKN1AP38936 164 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 TRAV9-1A0A075B6T8 112 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 CTSBP07858 339 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 RNASE1P07998 156 aaKnown RBP9.33□□□□□ -0.92
FN1-207ENST00000421182 DANCRP0C864 163 aa9.33□□□□□ -0.92
FN1-207ENST00000421182 RNASE4P34096 147 aaKnown RBP9.33□□□□□ -0.92
FN1-207ENST00000421182 C15orf61A6NNL5 157 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 PLA2G10O15496 165 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 LMX1BO60663 402 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 SRD5A1P18405 259 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 FAM219BQ5XKK7 198 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 TMEM183AQ8IXX5 376 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 C3orf56Q8N813 242 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 NPCDR1Q9BY65 106 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 PAM16Q9Y3D7 125 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 TRAV40A0A0B4J280 105 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 TDGF1P13385 188 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 ZNF79Q15937 498 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 TRAV21A0A0B4J279 112 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 UCP1P25874 307 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 CRYBB3P26998 211 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 CENPWQ5EE01 88 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 TMEM42Q69YG0 159 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 SIGLEC5O15389 551 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 PAX8Q06710 450 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 OR52E5Q8NH55 327 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 RUNX1Q01196 453 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
FN1-207ENST00000421182 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
FN1-207ENST00000421182 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
FN1-207ENST00000421182 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
FN1-207ENST00000421182 OTORQ9NRC9 128 aa9.31□□□□□ -0.92
FN1-207ENST00000421182 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
FN1-207ENST00000421182 PEX7O00628 323 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms