RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 UBQLN2Q9UHD9 624 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 SMPXQ9UHP9 88 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 IGHV3OR16-8A0A075B7F1 116 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 CORTO00230 105 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 ZNF207O43670 478 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 CD5P06127 495 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 NPBWR1P48145 328 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 PPP5CP53041 499 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 MRPS10P82664 201 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 SSBP1Q04837 148 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 Q6ZWC4 215 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 GPR141Q7Z602 305 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 TMEM229BQ8NBD8 167 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 TMEM116Q8NCL8 245 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 DUSP18Q8NEJ0 188 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 RNASE11Q8TAA1 199 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 RRNAD1Q96FB5 475 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 OVOL2Q9BRP0 275 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 NXF2Q9GZY0 626 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 NAA50Q9GZZ1 169 aaKnown RBP15.89■□□□□ 0.13
PTPN4-202ENST00000420482 ENY2Q9NPA8 101 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 TP53TG1Q9Y2A0 90 aa15.89■□□□□ 0.13
PTPN4-202ENST00000420482 TRAV14DV4A0A0A6YYC5 116 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 IGHV7-4-1A0A0J9YVY3 117 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 SCGB2A1O75556 95 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 RAB3DO95716 219 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 CTSDP07339 412 aaPredicted RBP15.88■□□□□ 0.13
PTPN4-202ENST00000420482 PI3P19957 117 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 SCGB2B2Q4G0G5 96 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 STPG3Q8N7X2 389 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 OR10C1Q96KK4 312 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 TP53RKQ96S44 253 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 RHPN1-AS1Q9BWJ2 59 aa15.88■□□□□ 0.13
PTPN4-202ENST00000420482 MRPS26Q9BYN8 205 aaKnown RBP15.88■□□□□ 0.13
PTPN4-202ENST00000420482 KIR2DL5BA0A0G2JN68 375 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 KIR2DL5BA0A0G2JPC4 375 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 GABARAPH6UMI1 98 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 SMIM18P0DKX4 95 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 PAFAH1B2P68402 229 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 MEF2DQ14814 521 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 STEAP1BQ6NZ63 245 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 KIR2DL5AQ8N109 375 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 KIR2DL5BQ8NHK3 375 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 GALNT14Q96FL9 552 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 ABHD1Q96SE0 405 aa15.87■□□□□ 0.13
PTPN4-202ENST00000420482 INS-IGF2F8WCM5 200 aa15.86■□□□□ 0.13
PTPN4-202ENST00000420482 CHEK1O14757 476 aa15.86■□□□□ 0.13
PTPN4-202ENST00000420482 SPRY2O43597 315 aa15.86■□□□□ 0.13
PTPN4-202ENST00000420482 CD74P04233 296 aa15.86■□□□□ 0.13
PTPN4-202ENST00000420482 WFDC3Q8IUB2 231 aa15.86■□□□□ 0.13
PTPN4-202ENST00000420482 RABL2AQ9UBK7 228 aaPredicted RBP15.86■□□□□ 0.13
PTPN4-202ENST00000420482 RABL2BQ9UNT1 228 aa15.86■□□□□ 0.13
PTPN4-202ENST00000420482 C14orf166Q9Y224 244 aaKnown RBP15.86■□□□□ 0.13
PTPN4-202ENST00000420482 ST8SIA3O43173 380 aa15.85■□□□□ 0.13
PTPN4-202ENST00000420482 IGKV1-5P01602 117 aa15.85■□□□□ 0.13
PTPN4-202ENST00000420482 HOXA1P49639 335 aaPredicted RBP15.85■□□□□ 0.13
PTPN4-202ENST00000420482 ODF3L2Q3SX64 289 aa15.85■□□□□ 0.13
PTPN4-202ENST00000420482 OR13C8Q8NGS7 320 aa15.85■□□□□ 0.13
PTPN4-202ENST00000420482 RNF2Q99496 336 aa15.85■□□□□ 0.13
PTPN4-202ENST00000420482 DISC1C4P0D8 188 aa15.84■□□□□ 0.13
PTPN4-202ENST00000420482 IGHV3-48P01763 117 aa15.84■□□□□ 0.13
PTPN4-202ENST00000420482 IZUMO4Q1ZYL8 232 aa15.84■□□□□ 0.13
PTPN4-202ENST00000420482 SPINK9Q5DT21 86 aa15.84■□□□□ 0.13
PTPN4-202ENST00000420482 ZNF600Q6ZNG1 722 aa15.84■□□□□ 0.13
PTPN4-202ENST00000420482 FAM219AQ8IW50 185 aa15.84■□□□□ 0.13
PTPN4-202ENST00000420482 HYDINQ4G0P3 5121 aa15.83■□□□□ 0.13
PTPN4-202ENST00000420482 A0A0B4J293 547 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 UCP1P25874 307 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 SURF2Q15527 256 aaPredicted RBP15.83■□□□□ 0.12
PTPN4-202ENST00000420482 DEFB135Q30KP9 77 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 TMEM217Q8N7C4 229 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 OR4D10Q8NGI6 311 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 MARCH1Q8TCQ1 289 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 TMEM231Q9H6L2 316 aa15.83■□□□□ 0.12
PTPN4-202ENST00000420482 TEX13DA0A0J9YY54 714 aaPredicted RBP15.82■□□□□ 0.12
PTPN4-202ENST00000420482 P0C879 139 aa15.82■□□□□ 0.12
PTPN4-202ENST00000420482 TNFRSF9Q07011 255 aa15.82■□□□□ 0.12
PTPN4-202ENST00000420482 SP6Q3SY56 376 aa15.82■□□□□ 0.12
PTPN4-202ENST00000420482 IGHV3-49A0A0A0MS15 119 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 RPL35AP18077 110 aaKnown RBP15.81■□□□□ 0.12
PTPN4-202ENST00000420482 OPRK1P41145 380 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 ETV6P41212 452 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 TFPI2P48307 235 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 DHODHQ02127 395 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 IL18Q14116 193 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 TOMM20LQ6UXN7 152 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 RAB2BQ8WUD1 216 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 SMIM4Q8WVI0 70 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 RNF183Q96D59 192 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 TMEM222Q9H0R3 208 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.81■□□□□ 0.12
PTPN4-202ENST00000420482 CACFD1Q9UGQ2 172 aa15.81■□□□□ 0.12
PTPN4-202ENST00000420482 IGKV3-7A0A075B6H7 116 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 A0A1W2PS18 150 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 CXorf65A6NEN9 183 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 DNASE2O00115 360 aaPredicted RBP15.8■□□□□ 0.12
PTPN4-202ENST00000420482 AKAIN1P0CW23 69 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 ALDH3B2P48448 385 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 SPCS3P61009 180 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 TCF24Q7RTU0 167 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms