RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 IQCF2Q8IXL9 164 aa8.21□□□□□ -1.1
SSBP3-206ENST00000420121 TMEM229BQ8NBD8 167 aa8.21□□□□□ -1.1
SSBP3-206ENST00000420121 OR1L6Q8NGR2 347 aa8.21□□□□□ -1.1
SSBP3-206ENST00000420121 OR4A16Q8NH70 328 aa8.21□□□□□ -1.1
SSBP3-206ENST00000420121 SPAG8Q99932 426 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-206ENST00000420121 MRPS26Q9BYN8 205 aaKnown RBP8.21□□□□□ -1.1
SSBP3-206ENST00000420121 INS-IGF2F8WCM5 200 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 GABARAPH6UMI1 98 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 ZNF207O43670 478 aaKnown RBP8.2□□□□□ -1.1
SSBP3-206ENST00000420121 MT-CO2P00403 227 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 IGHV3-48P01763 117 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 PGAM2P15259 253 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 PPP5CP53041 499 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 ANKRD55Q3KP44 614 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 Q56UQ5 140 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 SPINK9Q5DT21 86 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
SSBP3-206ENST00000420121 UBAC2Q8NBM4 344 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 OR13C8Q8NGS7 320 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 TERB2Q8NHR7 220 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 ANAPC16Q96DE5 110 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 OR10C1Q96KK4 312 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 OVOL2Q9BRP0 275 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 C20orf24Q9BUV8 137 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 GGTLC1Q9BX51 225 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 UBQLN2Q9UHD9 624 aa8.2□□□□□ -1.1
SSBP3-206ENST00000420121 LOC102724200A0A096LPH7 203 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-206ENST00000420121 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 ST8SIA3O43173 380 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 UCP1P25874 307 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 MFAP4P55083 255 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 SP6Q3SY56 376 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 FAAP20Q6NZ36 180 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 STEAP1BQ6NZ63 245 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 Q6ZRM9 215 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 LHFPL5Q8TAF8 219 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 MARCH1Q8TCQ1 289 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 DYNC2LI1Q8TCX1 351 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 MISP3Q96FF7 219 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 TXN2Q99757 166 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 NXF2Q9GZY0 626 aaKnown RBP8.19□□□□□ -1.1
SSBP3-206ENST00000420121 SMPXQ9UHP9 88 aa8.19□□□□□ -1.1
SSBP3-206ENST00000420121 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
SSBP3-206ENST00000420121 IGHV7-4-1A0A0J9YVY3 117 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 CHEK1O14757 476 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 RAB3DO95716 219 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 CTSDP07339 412 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-206ENST00000420121 RNASE2P10153 161 aaKnown RBP8.18□□□□□ -1.1
SSBP3-206ENST00000420121 TAS2R19P59542 299 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 SSBP1Q04837 148 aaKnown RBP8.18□□□□□ -1.1
SSBP3-206ENST00000420121 AARDQ4LEZ3 155 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 FAM90A2PQ658T7 463 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 GPR141Q7Z602 305 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 C15orf40Q8WUR7 153 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 SMIM4Q8WVI0 70 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 RNF2Q99496 336 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 RTBDNQ9BSG5 229 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-206ENST00000420121 MRPL36Q9P0J6 103 aaKnown RBP8.18□□□□□ -1.1
SSBP3-206ENST00000420121 HYDINQ4G0P3 5121 aa8.18□□□□□ -1.1
SSBP3-206ENST00000420121 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 CTDSPLO15194 276 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 NUPL2O15504 423 aaKnown RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 RGS5O15539 181 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 AKR1C2P52895 323 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 MRPS10P82664 201 aaKnown RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 ERHP84090 104 aaKnown RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 RELQ04864 619 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 BSXQ3C1V8 233 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 SCGB2B2Q4G0G5 96 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 WFDC3Q8IUB2 231 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 CLVS1Q8IUQ0 354 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 CCDC71LQ8N9Z2 235 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 OR4C16Q8NGL9 310 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 ZFAND1Q8TCF1 268 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 GLYATL2Q8WU03 294 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 PINX1Q96BK5 328 aaKnown RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 TMEM222Q9H0R3 208 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 FNDC4Q9H6D8 234 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-206ENST00000420121 COPZ2Q9P299 210 aa8.17□□□□□ -1.1
SSBP3-206ENST00000420121 A0A1B0GU03 582 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 CDS2O95674 445 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 OR5AC1P0C628 307 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 ETV6P41212 452 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 EWSR1Q01844 656 aaKnown RBP eCLIP8.16□□□□□ -1.1
SSBP3-206ENST00000420121 ZNF124Q15973 351 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 LAMTOR1Q6IAA8 161 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 TOMM20LQ6UXN7 152 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 SLC35G3Q8N808 338 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 TMEM116Q8NCL8 245 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 SOSTQ9BQB4 213 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 SLIRPQ9GZT3 109 aaKnown RBP8.16□□□□□ -1.1
SSBP3-206ENST00000420121 VSIRQ9H7M9 311 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 CCDC59Q9P031 241 aaKnown RBP8.16□□□□□ -1.1
SSBP3-206ENST00000420121 GPR132Q9UNW8 380 aa8.16□□□□□ -1.1
SSBP3-206ENST00000420121 AGRNO00468 2067 aa8.15□□□□□ -1.1
SSBP3-206ENST00000420121 IGHV3OR16-13A0A075B7E8 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms