RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 IL1F10Q8WWZ1 152 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 RNF7Q9UBF6 113 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 PPP1R3CQ9UQK1 317 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 PSPNO60542 156 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 C3orf79P0CE67 100 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 PRDX2P32119 198 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 ZCCHC24Q8N2G6 241 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 DERL1Q9BUN8 251 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 GCM1Q9NP62 436 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 NAT8BQ9UHF3 227 aa12.14□□□□□ -0.47
SEMA4D-204ENST00000420101 CACNA1AO00555 2505 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 PCNX1Q96RV3 2341 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 TMEM30CPA0ZSE6 113 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 ZG16O60844 167 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 PLAUP00749 431 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 AMY1AP04745 511 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 LINC00869P0C866 280 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 APOBEC3AP31941 199 aaPredicted RBP12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 ZNF497Q6ZNH5 498 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 Q8N7P7 452 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 EAF1Q96JC9 268 aaPredicted RBP12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 KCNS2Q9ULS6 477 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 V9GYV3 84 aa12.13□□□□□ -0.47
SEMA4D-204ENST00000420101 ODAMA1E959 279 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 K7ERU9 68 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 ZNF16P17020 682 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 CFHR2P36980 270 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 GATA4P43694 442 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 REG1BP48304 166 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 AESQ08117 197 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 TMEM136Q6ZRR5 245 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 NIT1Q86X76 327 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 FAM103A1Q9BTL3 118 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 SAP30LQ9HAJ7 183 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 MBNL3Q9NUK0 354 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 CADP27708 2225 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 ATRXP46100 2492 aa12.12□□□□□ -0.47
SEMA4D-204ENST00000420101 ARF6P62330 175 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 POLEQ07864 2286 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 FAM90A1Q86YD7 464 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 PPP1R35Q8TAP8 253 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 WIPF2Q8TF74 440 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 FAM216AQ8WUB2 273 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 CA2P00918 260 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 RPL31P62899 125 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 VPS25Q9BRG1 176 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 MS4A5Q9H3V2 200 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 SEPSECSQ9HD40 501 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 CLN8Q9UBY8 286 aa12.11□□□□□ -0.47
SEMA4D-204ENST00000420101 COL6A6A6NMZ7 2263 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 SCO2A0A1W2PP80 73 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 B9A039 149 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 H0YJW9 148 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 ISLRO14498 428 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 CIDEAO60543 219 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 THBS3P49746 956 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 HINT1P49773 126 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 RTL8BQ17RB0 113 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 PDLIM3Q53GG5 364 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 OCIAD2Q56VL3 154 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 UNQ5815/PRO19632Q6UWF5 114 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 OR4F17Q8NGA8 305 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 TSKUQ8WUA8 353 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 CSTL1Q9H114 145 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
SEMA4D-204ENST00000420101 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 HSBP1L1C9JCN9 74 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 RAMP3O60896 148 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 LHBP01229 141 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 EIF4EBP1Q13541 118 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 C12orf54Q6X4T0 127 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 H2BFWTQ7Z2G1 175 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 ZNF808Q8N4W9 903 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 OR52E5Q8NH55 327 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 CCL17Q92583 94 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 CST9LQ9H4G1 147 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 SLC25A10Q9UBX3 287 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 F2Z2F3 143 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 K7EN84 100 aa12.09□□□□□ -0.47
SEMA4D-204ENST00000420101 PMCHP20382 165 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms