RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 TCTEX1D4Q5JR98 221 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF506Q5JVG8 444 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 ARL9Q6T311 187 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF429Q86V71 674 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 SLC25A42Q86VD7 318 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 TGIF2LYQ8IUE0 185 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 OR10G6Q8NH81 332 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 MFSD8Q8NHS3 518 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 SYNPRQ8TBG9 265 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 GPR119Q8TDV5 335 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 COX14Q96I36 57 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 RASL11BQ9BPW5 248 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 OR11A1Q9GZK7 315 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 TMEM106BQ9NUM4 274 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF581Q9P0T4 197 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 NAV3Q8IVL0 2385 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 UNC13CQ8NB66 2214 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 A0A1B0GUV1 79 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 NKX2-6A6NCS4 301 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 IFITM5A6NNB3 132 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR11H12B2RN74 326 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 PLPP3O14495 311 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 MT-CO2P00403 227 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 HLA-AP01891 365 aaKnown RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 AKR1C4P17516 323 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 AZU1P20160 251 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 SMIM11AP58511 58 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 UBE2NP61088 152 aaKnown RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 TMEM176BQ3YBM2 270 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF658BQ4V348 819 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 TOMM20LQ6UXN7 152 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF615Q8N8J6 731 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR11H1Q8NG94 326 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR2Z1Q8NG97 314 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR4B1Q8NGF8 309 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR1N2Q8NGR9 330 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR11H2Q8NH07 326 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 ITLN1Q8WWA0 313 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 SFRP2Q96HF1 295 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 DERL3Q96Q80 235 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 SDF2L1Q9HCN8 221 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 THADAQ6YHU6 1953 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 IGKV1-8A0A0C4DH67 115 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 IGHV1-69-2A0A0G2JMI3 117 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 BMPR1BO00238 502 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 SRP19P09132 144 aaKnown RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 SEC11BP0C7V7 166 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 RPS4Y1P22090 263 aaKnown RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF121P58317 390 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-207ENST00000419472 TAS2R30P59541 319 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 BAXQ07812 192 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 FZD2Q14332 565 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 C1orf100Q5SVJ3 147 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 RUSC1-AS1Q66K80 236 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 LINC00173Q6ZV60 143 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 LRP11Q86VZ4 500 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 CA13Q8N1Q1 262 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 LINC00471Q8N535 108 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 RAB8BQ92930 207 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 JPT2Q9H910 190 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 OR5V1Q9UGF6 321 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 VSIG4Q9Y279 399 aa3.89□□□□□ -1.79
VPS13A-207ENST00000419472 PLXNA2O75051 1894 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 A0A1B0GX12 115 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 EEF1E1-BLOC1S5C9J1V9 151 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 HYPMO75409 117 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 CD3DP04234 171 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 IGLC2P0DOY2 106 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 IGLC3P0DOY3 106 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 GRPRP30550 384 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 CYB561P49447 251 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 TAS2R31P59538 309 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 PSG5Q15238 335 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 ACOT6Q3I5F7 207 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-207ENST00000419472 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 SAXO1Q8IYX7 474 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 FER1L6-AS1Q8NA97 138 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 TMEM229BQ8NBD8 167 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 OR10G3Q8NGC4 313 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 VN1R17PQ8TDU5 208 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 BMFQ96LC9 184 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 SIGMAR1Q99720 223 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 CHCHD5Q9BSY4 110 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 EFCAB11Q9BUY7 163 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 XCL2Q9UBD3 114 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 ALPK2Q86TB3 2170 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 ASCC3Q8N3C0 2202 aaKnown RBP3.88□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF106Q9H2Y7 1883 aaKnown RBP3.88□□□□□ -1.79
VPS13A-207ENST00000419472 MDC1Q14676 2089 aaKnown RBP3.88□□□□□ -1.79
VPS13A-207ENST00000419472 KIR2DS1A0A191URI9 304 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 IGLC7A0M8Q6 106 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 RBFOX3A6NFN3 312 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 H7BYZ3 331 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 GABRA3P34903 492 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 PPP1CAP62136 330 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 GNB2P62879 340 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 CACNG7P62955 275 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms