RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 OR1P1Q8NH06 330 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 FMC1Q96HJ9 113 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 CGAP01215 116 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 ZCCHC24Q8N2G6 241 aaKnown RBP9.44□□□□□ -0.9
PTCH1-205ENST00000418258 OR13A1Q8NGR1 328 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 IFI27L2Q9H2X8 130 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-205ENST00000418258 EGR4Q05215 589 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 TRBV9A0A0B4J1U6 114 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-205ENST00000418258 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 LILRA1O75019 489 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 CD33P20138 364 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 MEF2CQ06413 473 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-205ENST00000418258 COTL1Q14019 142 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 OR5AN1Q8NGI8 311 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 OR10S1Q8NGN2 331 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 SHANK1Q9Y566 2161 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 TRAV14DV4A0A0A6YYC5 116 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 LYNX1G3V0Z9 82 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 NDUFA3O95167 84 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 LYNX1P0DP58 116 aa9.44□□□□□ -0.9
PTCH1-205ENST00000418258 LHX2P50458 406 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 LRTM2Q8N967 370 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 RNASEH2CQ8TDP1 164 aaKnown RBP9.43□□□□□ -0.9
PTCH1-205ENST00000418258 VWA8A3KMH1 1905 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 IQCF6A8MYZ5 107 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 CCL3L1P16619 93 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 UCP3P55916 312 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF585BQ52M93 769 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 USF3Q68DE3 2245 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 SAP30O75446 220 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 LEPP41159 167 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 GRIFINA4D1Z8 144 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 UMODP07911 640 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 CSRP1P21291 193 aaKnown RBP9.43□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF385CQ66K41 422 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-205ENST00000418258 AICDAQ9GZX7 198 aa9.43□□□□□ -0.9
PTCH1-205ENST00000418258 E9PLN8 166 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 CYB5R2Q6BCY4 276 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 VKORC1Q9BQB6 163 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 UQCR10Q9UDW1 63 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 OR11H12B2RN74 326 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 SIGLEC5O15389 551 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 PSCAO43653 123 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 OR11H1Q8NG94 326 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 OR11H2Q8NH07 326 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 C1QTNF5Q9BXJ0 243 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 Q9H3A6 140 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 C11orf68Q9H3H3 251 aaKnown RBP9.42□□□□□ -0.9
PTCH1-205ENST00000418258 A0A0G2JK05 382 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 C17orf98A8MV24 154 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF250P15622 560 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 RND3P61587 244 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 WNT2P09544 360 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 EGR1P18146 543 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 DSCR9P59020 149 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 WFDC12Q8WWY7 111 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 PPP1R3EQ9H7J1 279 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 HOXA5P20719 270 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 TBR1Q16650 682 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 C1QL2Q7Z5L3 287 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 FAM90A1Q86YD7 464 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 MRPS18CQ9Y3D5 142 aaKnown RBP9.42□□□□□ -0.9
PTCH1-205ENST00000418258 TBL2Q9Y4P3 447 aaKnown RBP9.42□□□□□ -0.9
PTCH1-205ENST00000418258 RHOGP84095 191 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 SPRR3Q9UBC9 169 aa9.42□□□□□ -0.9
PTCH1-205ENST00000418258 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 K7ERU9 68 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SMIM13P0DJ93 91 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 IGLV3-21P80748 117 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-205ENST00000418258 TFF3Q07654 80 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SOD3P08294 240 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 CA7P43166 264 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 PCNX2A6NKB5 2137 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 NCOR1O75376 2440 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 C1QTNF9BB2RNN3 333 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 TMEM133Q9H2Q1 129 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 ATP5LO75964 103 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-205ENST00000418258 CBLN1P23435 193 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-205ENST00000418258 ZXDCQ2QGD7 858 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SSC4DQ8WTU2 575 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SRSF7Q16629 238 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTCH1-205ENST00000418258 SLC25A38Q96DW6 304 aa9.41□□□□□ -0.9
PTCH1-205ENST00000418258 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms