RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 HBG2P69892 147 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 TNFRSF9Q07011 255 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 KLRD1Q13241 179 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 IL15RAQ13261 267 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CLINT1Q14677 625 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 PLGLAQ15195 96 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 SPINK9Q5DT21 86 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CLLU1Q5K131 121 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 SPANXN5Q5MJ07 72 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 UTF1Q5T230 341 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 VMO1Q7Z5L0 202 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 BAP18Q8IXM2 172 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM252Q8N6L7 170 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 LY6G5BQ8NDX9 201 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR4C13Q8NGP0 309 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 STOML3Q8TAV4 291 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 LRRC20Q8TCA0 184 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 SCGB1C1Q8TD33 95 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 DTD1Q8TEA8 209 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 FLYWCH2Q96CP2 140 aaKnown RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 PHYHIPLQ96FC7 376 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 TSNAXQ99598 290 aaKnown RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF251Q9BRH9 671 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 RNF126Q9BV68 326 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 HINT2Q9BX68 163 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 PLEKHA3Q9HB20 300 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 LPAR2Q9HBW0 351 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 LYRM2Q9NU23 88 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 PRNDQ9UKY0 176 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 STRAPQ9Y3F4 350 aaKnown RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 INSIG2Q9Y5U4 225 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 KPTNQ9Y664 436 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 WSB1Q9Y6I7 421 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CACNA1AO00555 2505 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CFAP47Q6ZTR5 3102 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 SPTBN4Q9H254 2564 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 PCNX1Q96RV3 2341 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 DOCK11Q5JSL3 2073 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV3-72A0A0B4J1Y9 119 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV1-3A0A0C4DH29 117 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 UBE2L5PA0A1B0GUS4 154 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 A0A1W2PN81 502 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 BUB1B-PAK6H3BSN5 160 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 KBTBD11O94819 623 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SCGB1D1O95968 90 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 IFNA10P01566 189 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGLV1-47P01700 117 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PRH1P02810 166 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 METTL15P1P0C7V9 234 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 P0C879 139 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SAA1P0DJI8 122 aaPredicted RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 CT45A6P0DMU7 189 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 CT45A5P0DMU8 189 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 CT45A7P0DMV0 189 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 USF1P22415 310 aaPredicted RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PRTN3P24158 256 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 CHRNA7P36544 502 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 CAMLGP49069 296 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SULT1A1P50225 295 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 DLX1P56177 255 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 UBE2KP61086 200 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 RAB11AP62491 216 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PRB3Q04118 309 aaPredicted RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SLC38A11Q08AI6 406 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 HES1Q14469 280 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 POU2AF1Q16633 256 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 CLEC12BQ2HXU8 276 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 KIAA1644Q3SXP7 199 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 FAM74A1Q5RGS3 127 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 TPTE2P1Q5T6R2 138 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 RPL7L1Q6DKI1 246 aaKnown RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR8G2PQ6IF36 304 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR4A47Q6IF82 309 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 GTSCR1Q86UQ5 136 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 COMMD7Q86VX2 200 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PDZD9Q8IXQ8 264 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SLC7A5P1Q8MH63 180 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 VKORC1L1Q8N0U8 176 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 Q8N7P7 452 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 HSD17B11Q8NBQ5 300 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 MAPK1IP1LQ8NDC0 245 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR11H6Q8NGC7 330 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR10P1Q8NGE3 313 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR4P4Q8NGL7 312 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR5C1Q8NGR4 320 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR4A5Q8NH83 315 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 C10orf105Q8TEF2 133 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PCNPQ8WW12 178 aaKnown RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 LHX4Q969G2 390 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PINX1Q96BK5 328 aaKnown RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SMIM8Q96KF7 97 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATP5SQ99766 215 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM147Q9BVK8 224 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 COMMD5Q9GZQ3 224 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 FKBP11Q9NYL4 201 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 BET1LQ9NYM9 111 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 FOXA2Q9Y261 457 aaPredicted RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 TBL2Q9Y4P3 447 aaKnown RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR51B2Q9Y5P1 312 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 SMAD5-AS1Q9Y6J3 95 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms