RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 HYDINQ4G0P3 5121 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 IGHV3-49A0A0A0MS15 119 aa11.21□□□□□ -0.61
UBXN4-203ENST00000416538 ST8SIA3O43173 380 aa11.21□□□□□ -0.61
UBXN4-203ENST00000416538 S100GP29377 79 aa11.21□□□□□ -0.61
UBXN4-203ENST00000416538 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
UBXN4-203ENST00000416538 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
UBXN4-203ENST00000416538 SP6Q3SY56 376 aa11.21□□□□□ -0.61
UBXN4-203ENST00000416538 RBPMS2Q6ZRY4 209 aaKnown RBP11.21□□□□□ -0.61
UBXN4-203ENST00000416538 LHFPL5Q8TAF8 219 aa11.21□□□□□ -0.61
UBXN4-203ENST00000416538 ZNF486Q96H40 463 aaPredicted RBP11.21□□□□□ -0.61
UBXN4-203ENST00000416538 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.61
UBXN4-203ENST00000416538 AGRNO00468 2067 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
UBXN4-203ENST00000416538 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 K7EMT4 169 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 CTSDP07339 412 aaPredicted RBP11.2□□□□□ -0.62
UBXN4-203ENST00000416538 TBPP20226 339 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 EWSR1Q01844 656 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBXN4-203ENST00000416538 TMEM229BQ8NBD8 167 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 MARCH1Q8TCQ1 289 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 PINX1Q96BK5 328 aaKnown RBP11.2□□□□□ -0.62
UBXN4-203ENST00000416538 RNF2Q99496 336 aa11.2□□□□□ -0.62
UBXN4-203ENST00000416538 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 C15orf62A8K5M9 175 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 GABARAPH6UMI1 98 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 CHEK1O14757 476 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 RAB3DO95716 219 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 UCP1P25874 307 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 AKR1C2P52895 323 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 ZNF124Q15973 351 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 ANKRD55Q3KP44 614 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 SCGB2B2Q4G0G5 96 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 STEAP1BQ6NZ63 245 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 Q6ZRM9 215 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 SMIM4Q8WVI0 70 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
UBXN4-203ENST00000416538 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
UBXN4-203ENST00000416538 PLECQ15149 4684 aaKnown RBP11.19□□□□□ -0.62
UBXN4-203ENST00000416538 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
UBXN4-203ENST00000416538 MFAP4P55083 255 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 TAS2R19P59542 299 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 TERB2Q8NHR7 220 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 DYNC2LI1Q8TCX1 351 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 RTBDNQ9BSG5 229 aaPredicted RBP11.18□□□□□ -0.62
UBXN4-203ENST00000416538 RHPN1-AS1Q9BWJ2 59 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
UBXN4-203ENST00000416538 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
UBXN4-203ENST00000416538 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 NUPL2O15504 423 aaKnown RBP11.17□□□□□ -0.62
UBXN4-203ENST00000416538 RGS5O15539 181 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 APOHP02749 345 aaPredicted RBP11.17□□□□□ -0.62
UBXN4-203ENST00000416538 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 ETV6P41212 452 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 FAM90A2PQ658T7 463 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
UBXN4-203ENST00000416538 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 SLC35G3Q8N808 338 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 OR4C16Q8NGL9 310 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 COPZ2Q9P299 210 aa11.17□□□□□ -0.62
UBXN4-203ENST00000416538 A0A1B0GU03 582 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 GNG7O60262 68 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 YIF1AO95070 293 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 RELQ04864 619 aaPredicted RBP11.16□□□□□ -0.62
UBXN4-203ENST00000416538 TRIM16LQ309B1 348 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 GLYATL2Q8WU03 294 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 TXN2Q99757 166 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
UBXN4-203ENST00000416538 CCDC59Q9P031 241 aaKnown RBP11.16□□□□□ -0.62
UBXN4-203ENST00000416538 EPPK1P58107 5090 aaKnown RBP11.15□□□□□ -0.62
UBXN4-203ENST00000416538 IGKV3-7A0A075B6H7 116 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 OR4C46A6NHA9 309 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 RPL35AP18077 110 aaKnown RBP11.15□□□□□ -0.62
UBXN4-203ENST00000416538 TFPI2P48307 235 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
UBXN4-203ENST00000416538 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
UBXN4-203ENST00000416538 MLANAQ16655 118 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 CCDC71LQ8N9Z2 235 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 ST8SIA2Q92186 375 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 NAA60Q9H7X0 242 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 PRR13Q9NZ81 148 aa11.15□□□□□ -0.62
UBXN4-203ENST00000416538 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 CTDSPLO15194 276 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 CDS2O95674 445 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 IFNA17P01571 189 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 MRPS10P82664 201 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms