RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TMEM69Q5SWH9 247 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 TMEM244Q5VVB8 128 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 ASCL4Q6XD76 172 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR2W3Q7Z3T1 314 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 GABRG1Q8N1C3 465 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC22A24Q8N4F4 322 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 TOMM5Q8N4H5 51 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC35G3Q8N808 338 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 TMEM229BQ8NBD8 167 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 ACBD4Q8NC06 268 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 FDCSPQ8NFU4 85 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR10K1Q8NGX5 313 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR2AE1Q8NHA4 323 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 GRPEL2Q8TAA5 225 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 FNDC9Q8TBE3 224 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 CPNE4Q96A23 557 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 MRPL48Q96GC5 212 aaKnown RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 JSRP1Q96MG2 331 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZFP3Q96NJ6 502 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 UQCC2Q9BRT2 126 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 CHCHD7Q9BUK0 85 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 CHST6Q9GZX3 395 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 FXYD6Q9H0Q3 95 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 HDHD2Q9H0R4 259 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 EXO5Q9H790 373 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 RNF122Q9H9V4 155 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 MYOZ1Q9NP98 299 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 TMEM138Q9NPI0 162 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 EMC3Q9P0I2 261 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 MYEF2Q9P2K5 600 aaKnown RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 ATPIF1Q9UII2 106 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 MCTS1Q9ULC4 181 aaKnown RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 BOKQ9UMX3 212 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 KLF13Q9Y2Y9 288 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 NUBP2Q9Y5Y2 271 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 CACNA1HO95180 2353 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 AKAP13Q12802 2813 aa1.89□□□□□ -2.11
HMGB1P11-201ENST00000413899 MUC6Q6W4X9 2439 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CNTRLQ7Z7A1 2325 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 DMDP11532 3685 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGHV3OR16-8A0A075B7F1 116 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 KBTBD11-OT1A0A1B0GTJ5 212 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 PQLC2LA1A4F0 135 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 NAP1L6A6NFF2 107 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR5H1A6NKK0 313 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 H7C1H1 209 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 SULT1C2O00338 296 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 FABP7O15540 132 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 SGCEO43556 437 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR2A4O95047 310 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CFDP00746 253 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 HLA-HP01893 362 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CD3DP04234 171 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CD2P06729 351 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 AKAIN1P0CW23 69 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CXCL2P19875 107 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 RAB4AP20338 218 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CD82P27701 267 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 TALDO1P37837 337 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 ERVS71-1P61550 626 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 SNRPD2P62316 118 aaKnown RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 SUPT4H1P63272 117 aaKnown RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 PPP1R1AQ13522 171 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 PABPC1L2AQ5JQF8 200 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 AADACL3Q5VUY0 350 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 GLT8D1Q68CQ7 371 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC25A25Q6KCM7 469 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 TMEM53Q6P2H8 277 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 GLIPR1L1Q6UWM5 242 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 DRAM2Q6UX65 266 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 AAED1Q7RTV5 226 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 TRAPPC6BQ86SZ2 158 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF101Q8IZC7 436 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 LRRC18Q8N456 261 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 RPRMLQ8N4K4 120 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 SPICQ8N5J4 248 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 JAGN1Q8N5M9 183 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF283Q8N7M2 679 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 C19orf18Q8NEA5 215 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR4S1Q8NGB4 309 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR5D18Q8NGL1 313 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR5D14Q8NGL3 314 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 ITFG2Q969R8 447 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 REEP6Q96HR9 211 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 ARHGAP5-AS1Q96IT6 56 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 RBP7Q96R05 134 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR2A7Q96R45 310 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 PECRQ9BY49 303 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 TOLLIPQ9H0E2 274 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CST11Q9H112 138 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 BANF2Q9H503 90 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 GEMIN7Q9H840 131 aaKnown RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 BEX1Q9HBH7 125 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 CRLF2Q9HC73 371 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 PAQR5Q9NXK6 330 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 COPZ2Q9P299 210 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 RABL2AQ9UBK7 228 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms