RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 X6R8D5 127 aa8.81□□□□□ -1
LIMS2-210ENST00000413578 IGHV4-4A0A075B6R2 117 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 ANKRD65E5RJM6 399 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 SNAPC5O75971 98 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 RFX2P48378 723 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 HERV-K104P61576 105 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 PAFAH1B2P68402 229 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 SPARTQ8N0X7 666 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 SEC22AQ96IW7 307 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 CNBD2Q96M20 576 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 TSC22D3Q99576 134 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 ZNF2Q9BSG1 426 aaPredicted RBP8.8□□□□□ -1
LIMS2-210ENST00000413578 FXYD6Q9H0Q3 95 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 RNF167Q9H6Y7 350 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 FAM212BQ9NTI7 297 aaPredicted RBP8.8□□□□□ -1
LIMS2-210ENST00000413578 EHFQ9NZC4 300 aa8.8□□□□□ -1
LIMS2-210ENST00000413578 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
LIMS2-210ENST00000413578 TRAV10A0A0B4J240 114 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 MEIS3P1A6NDR6 274 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 RTL8CO15255 209 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 XRCC3O43542 346 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 IGKV1-39P01597 117 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 IGHV3-48P01763 117 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 IGKV1D-39P04432 117 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 MIFP14174 115 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 NAT1P18440 290 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 C4BPBP20851 252 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 PSMB9P28065 219 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 PRCDQ00LT1 54 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 TMEM41BQ5BJD5 291 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 PVRIGQ6DKI7 326 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 CSNK1G2-AS1Q8NCQ2 148 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 MISP3Q96FF7 219 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 GINS3Q9BRX5 216 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 RNF126Q9BV68 326 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 SSR3Q9UNL2 185 aa8.79□□□□□ -1
LIMS2-210ENST00000413578 LRP1BQ9NZR2 4599 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 HSPG2P98160 4391 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 GPR31O00270 319 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 ST8SIA3O43173 380 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 GNG7O60262 68 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 AMBPP02760 352 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 HSPA13P48723 471 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 MXD1Q05195 221 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 IDNKQ5T6J7 187 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 IZUMO2Q6UXV1 221 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 CMTM1Q8IZ96 169 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 DUSP18Q8NEJ0 188 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 DIABLOQ9NR28 239 aa8.78□□□□□ -1
LIMS2-210ENST00000413578 PUS1Q9Y606 427 aaKnown RBP eCLIP8.78□□□□□ -1
LIMS2-210ENST00000413578 IGHV3-66A0A0C4DH42 116 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 A0A1B0GU03 582 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 INS-IGF2F8WCM5 200 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 K7EQG2 157 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 DNASE2O00115 360 aaPredicted RBP8.77□□□□□ -1.01
LIMS2-210ENST00000413578 SPP1P10451 314 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 MORN3Q6PF18 240 aaPredicted RBP8.77□□□□□ -1.01
LIMS2-210ENST00000413578 ZNF600Q6ZNG1 722 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 STHQ8IWL8 128 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 FCGR1BQ92637 280 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 GRAMD2BQ96HH9 432 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
LIMS2-210ENST00000413578 TMEM127O75204 238 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 PMP2P02689 132 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 EIF4EP06730 217 aaKnown RBP8.76□□□□□ -1.01
LIMS2-210ENST00000413578 NPBWR1P48145 328 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 HSPE1P61604 102 aaKnown RBP8.76□□□□□ -1.01
LIMS2-210ENST00000413578 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 POM121L12Q8N7R1 296 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 TSPAN14Q8NG11 270 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 DCANP1Q8TF63 244 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 PINX1Q96BK5 328 aaKnown RBP8.76□□□□□ -1.01
LIMS2-210ENST00000413578 IFT46Q9NQC8 304 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 RAB26Q9ULW5 256 aa8.76□□□□□ -1.01
LIMS2-210ENST00000413578 DNAH5Q8TE73 4624 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 PRSS29PA6NIE9 313 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 KNCNA6PVL3 124 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 TMEM50AO95807 157 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 P0C879 139 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 CRYBB3P26998 211 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 TAS2R46P59540 309 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 PHLDA2Q53GA4 152 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 LYSMD2Q8IV50 215 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 OR5H2Q8NGV7 314 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 OR6F1Q8NGZ6 308 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 SCRT1Q9BWW7 348 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 VCX3BQ9H321 246 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 TMEM231Q9H6L2 316 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 MRPL36Q9P0J6 103 aaKnown RBP8.75□□□□□ -1.01
LIMS2-210ENST00000413578 RABAC1Q9UI14 185 aa8.75□□□□□ -1.01
LIMS2-210ENST00000413578 HRH1P35367 487 aa8.74□□□□□ -1.01
LIMS2-210ENST00000413578 TAS2R20P59543 309 aa8.74□□□□□ -1.01
LIMS2-210ENST00000413578 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
LIMS2-210ENST00000413578 ERHP84090 104 aaKnown RBP8.74□□□□□ -1.01
LIMS2-210ENST00000413578 H2BFWTQ7Z2G1 175 aa8.74□□□□□ -1.01
LIMS2-210ENST00000413578 TBC1D26Q86UD7 250 aa8.74□□□□□ -1.01
LIMS2-210ENST00000413578 MRGPRFQ96AM1 343 aa8.74□□□□□ -1.01
LIMS2-210ENST00000413578 FNDC4Q9H6D8 234 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms