RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CRYAAP02489 173 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 APCSP02743 223 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 TLE1Q04724 770 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 KLF5Q13887 457 aaPredicted RBP4.29□□□□□ -1.72
HERC4-205ENST00000412272 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 OR5C1Q8NGR4 320 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 FAM60AQ9NP50 221 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 PROCRQ9UNN8 238 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 IGKV1D-42A0A075B6H8 117 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 ZNF840PA6NDX5 716 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 RENP00797 406 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 SCTP09683 121 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 CCL1P22362 96 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 OR10J6PQ8NGY7 276 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 IL1F10Q8WWZ1 152 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 FAM173AQ9BQD7 235 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 TMEM222Q9H0R3 208 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 SLC25A10Q9UBX3 287 aaPredicted RBP4.29□□□□□ -1.72
HERC4-205ENST00000412272 WNT10BO00744 389 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 FOXS1O43638 330 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 ATP5LO75964 103 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 STC2O76061 302 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 NKX2-2O95096 273 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 C4orf48Q5BLP8 95 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 LILRA3Q8N6C8 439 aaPredicted RBP4.28□□□□□ -1.72
HERC4-205ENST00000412272 OR52N5Q8NH56 324 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 TMEM59Q9BXS4 323 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 JPT2Q9H910 190 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 IL36BQ9NZH7 164 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 DOCK11Q5JSL3 2073 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 IGLV1-36A0A0B4J1U3 117 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 GGTLC3B5MD39 225 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 C16orf97H3BN30 126 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 CTGFP29279 349 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 PSMB3P49720 205 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 DSCR4P56555 118 aaPredicted RBP4.28□□□□□ -1.72
HERC4-205ENST00000412272 AMTNQ6UX39 209 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 LYZL2Q7Z4W2 148 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 TEX45Q8NA69 505 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 GATD1Q8NB37 220 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 LRRC29Q8WV35 223 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 FGF14Q92915 247 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 KLF16Q9BXK1 252 aaPredicted RBP4.28□□□□□ -1.72
HERC4-205ENST00000412272 K7EQS6 105 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 DUSP14O95147 198 aaKnown RBP4.28□□□□□ -1.72
HERC4-205ENST00000412272 CNTFRP26992 372 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 CAMPP49913 170 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 ZNF90Q03938 601 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 LINC00173Q6ZV60 143 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 WIPF2Q8TF74 440 aaPredicted RBP4.28□□□□□ -1.72
HERC4-205ENST00000412272 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 PBOV1Q9GZY1 135 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 PRORYQ9H606 182 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 FZR1Q9UM11 496 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 TCF19Q9Y242 345 aa4.28□□□□□ -1.72
HERC4-205ENST00000412272 IGLL5B9A064 214 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 C4orf51C9J302 202 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 K7ERJ3 54 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 M0R2P5 195 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 DNPH1O43598 174 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 ZNF688P0C7X2 276 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 SSR2P43308 183 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 CLDN2P57739 230 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
HERC4-205ENST00000412272 KLRB1Q12918 225 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 VGLL4Q14135 290 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 PARM1Q6UWI2 310 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 OR4X2Q8NGF9 303 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 URB1-AS1Q96HZ7 61 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 C1QTNF5Q9BXJ0 243 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 TMEM191AQ9H0A3 160 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 OR10A2Q9H208 303 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 NCOA6Q14686 2063 aaPredicted RBP4.27□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A18PA6NE21 464 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A16PA6NEW6 464 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A8PA6NJQ4 464 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A9PA6NNJ1 464 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 PF4P02776 101 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 OPRK1P41145 380 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 POLR2LP62875 67 aaKnown RBP4.27□□□□□ -1.73
HERC4-205ENST00000412272 IL17RELQ6ZVW7 336 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 ZNF295-AS1Q8N0V1 137 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 NT5CQ8TCD5 201 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 R3HDMLQ9H3Y0 253 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 TNFRSF19Q9NS68 423 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 THADAQ6YHU6 1953 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 CTXND1A0A1B0GTU2 59 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 TGFBR3LH3BV60 316 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 ANGPTL7O43827 346 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 SNCGO76070 127 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 CECR9P0C854 216 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 BCL3P20749 454 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 MRPS6P82932 125 aaKnown RBP4.27□□□□□ -1.73
HERC4-205ENST00000412272 CRIP3Q6Q6R5 217 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 OR5AS1Q8N127 324 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 H1FXQ92522 213 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms