RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 JPT2Q9H910 190 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 GPR132Q9UNW8 380 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 GRIFINA4D1Z8 144 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 LYNX1G3V0Z9 82 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 LYNX1P0DP58 116 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 ZNF818PQ6ZRF7 136 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 C1QL2Q7Z5L3 287 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 KLHL30-AS1Q8NEE0 82 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 TMEM222Q9H0R3 208 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 FHITP49789 147 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 FAM166AQ6J272 317 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 SLC25A15Q9Y619 301 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 CELA3BP08861 270 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 GZMBP10144 247 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 GLRXP35754 106 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 WDFY2Q96P53 400 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 MRPL32Q9BYC8 188 aaKnown RBP9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 CLPSP04118 112 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 OR10S1Q8NGN2 331 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 USF3Q68DE3 2245 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 ZNF79Q15937 498 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 FAM169BQ8N8A8 192 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 TRGC2P03986 189 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 LINC00299Q6ZSB3 139 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 NANOS3P60323 173 aaKnown RBP9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 SPACA3Q8IXA5 215 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 OR11H12B2RN74 326 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 CECR9P0C854 216 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 CD28P10747 220 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 GNLYP22749 145 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 OR11H1Q8NG94 326 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 OR11H2Q8NH07 326 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 ZCCHC24Q8N2G6 241 aaKnown RBP9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 TMEM86BQ8N661 226 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 TCF19Q9Y242 345 aa9.49□□□□□ -0.89
PRPF40A-202ENST00000410080 NCOA6Q14686 2063 aaPredicted RBP9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 F8WEM9 126 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 H0YL77 283 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 GATA4P43694 442 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 ZP1P60852 638 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 ALX4Q9H161 411 aaPredicted RBP9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 THBDP07204 575 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 MUC4Q99102 2169 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 TGIF2-C20orf24A0A0A6YYL0 155 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 TRAV2A0A0B4J234 112 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 TM4SF5O14894 197 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 HOXB1P14653 301 aaPredicted RBP9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 AGAP20933 346 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 APOHP02749 345 aaPredicted RBP9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 A0A0G2JMM0 328 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 A0A1W2PPB8 328 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 A0A1W2PRS3 328 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 KIR3DP1A8MWS1 328 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 C1QL1O75973 258 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 RFPL3SP0C7P2 107 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 SLC25A34Q6PIV7 304 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
PRPF40A-202ENST00000410080 LHFPL6Q9Y693 200 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 ZNF106Q9H2Y7 1883 aaKnown RBP9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 SIGLEC5O15389 551 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 NBEAP1P0C6P0 100 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 FMC1Q96HJ9 113 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 PKIBQ9C010 78 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 SPTAN1Q13813 2472 aaKnown RBP9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 FBLN7Q53RD9 439 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 LAMTOR3Q9UHA4 124 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 CGAP01215 116 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 SLC25A47Q6Q0C1 308 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 Q9H3A6 140 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 V9GYH0 126 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 RAG2P55895 527 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 FAM216BQ8N7L0 139 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 FER1L6-AS1Q8NA97 138 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 ST6GALNAC3Q8NDV1 305 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 KIAA1671Q9BY89 1806 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 TRGV1A0A0A0MS02 117 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 SIGLEC15Q6ZMC9 328 aa9.47□□□□□ -0.89
PRPF40A-202ENST00000410080 UMODP07911 640 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 WNT2P09544 360 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 RHOGP84095 191 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 G6PC2Q9NQR9 355 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 IGFBP2P18065 325 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 OR5P3Q8WZ94 311 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 C4orf51C9J302 202 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 IGHV1-2P23083 117 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 OBSL1O75147 1896 aa9.46□□□□□ -0.89
PRPF40A-202ENST00000410080 IGHV2OR16-5A0A0B4J2B6 119 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms