RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZNF616Q08AN1 781 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 ECSCRQ19T08 205 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 SLC16A13Q7RTY0 426 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 FAM213BQ8TBF2 198 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 ACY3Q96HD9 319 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 WNT10AQ9GZT5 417 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 F11RQ9Y624 299 aaKnown RBP9.85□□□□□ -0.83
CHMP3-204ENST00000409727 A0A1B0GV50 99 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 A6NDX4 124 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 ATP6V0E1O15342 81 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 AMY1AP04745 511 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 CD69Q07108 199 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 GAMTQ14353 236 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 AKR1C8PQ5T2L2 129 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 ASPHD1Q5U4P2 390 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 Q6ZRG5 221 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 HSD17B13Q7Z5P4 300 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-204ENST00000409727 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 ZNF114Q8NC26 417 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 OR5T1Q8NG75 326 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 OR1P1Q8NH06 330 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 CITED4Q96RK1 184 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 PARD6GQ9BYG4 376 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-204ENST00000409727 HRH4Q9H3N8 390 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 FNDC4Q9H6D8 234 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-204ENST00000409727 VSIRQ9H7M9 311 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 NPVFQ9HCQ7 196 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 YAE1D1Q9NRH1 226 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 DMRT1Q9Y5R6 373 aa9.84□□□□□ -0.83
CHMP3-204ENST00000409727 FLNAP21333 2647 aaKnown RBP9.84□□□□□ -0.83
CHMP3-204ENST00000409727 FGF16O43320 207 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 EGR2P11161 476 aaPredicted RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 CTRB1P17538 263 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 MDKP21741 143 aaPredicted RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 COMMD7Q86VX2 200 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 RNASEH2CQ8TDP1 164 aaKnown RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 MGST2Q99735 147 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 SRSF8Q9BRL6 282 aaKnown RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 TEX15Q9BXT5 2789 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 IER3P46695 156 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 KRTAP1-1Q07627 177 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 TEPPQ6URK8 271 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 PSMG3Q9BT73 122 aaPredicted RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 MRPL36Q9P0J6 103 aaKnown RBP9.83□□□□□ -0.84
CHMP3-204ENST00000409727 LINC00527Q9UJ94 153 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 PITPNC1Q9UKF7 332 aa9.83□□□□□ -0.84
CHMP3-204ENST00000409727 C17orf112F2Z3M2 114 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 G3V318 75 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 CD5LO43866 347 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHMP3-204ENST00000409727 MT-CO2P00403 227 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 SRP14P37108 136 aaKnown RBP9.82□□□□□ -0.84
CHMP3-204ENST00000409727 BLCAPP62952 87 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 DEFA5Q01523 94 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 FFAR4Q5NUL3 377 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 ACSM6Q6P461 480 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 UNQ5815/PRO19632Q6UWF5 114 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 SMR3AQ99954 134 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 S4R3C0 116 aa9.82□□□□□ -0.84
CHMP3-204ENST00000409727 IGKV1OR2-108A0A075B7D4 117 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 LINC00862A6NCI5 91 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 BTBD17A6NE02 478 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 UMAD1C9J7I0 102 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 AGPAT2O15120 278 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 GPX4P36969 197 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-204ENST00000409727 RND2P52198 227 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 RAB2AP61019 212 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 AANATQ16613 207 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 MIC13Q5XKP0 118 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 SGMS2Q8NHU3 365 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 LSM4Q9Y4Z0 139 aaKnown RBP9.81□□□□□ -0.84
CHMP3-204ENST00000409727 TIMM9Q9Y5J7 89 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 NPIPB5A8MRT5 1133 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 CORTO00230 105 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 HOXA3O43365 443 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-204ENST00000409727 MPDU1O75352 247 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 RAB5CP51148 216 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 BLOC1S1P78537 153 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 SERF2P84101 59 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 Q6YL49 198 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 Q6ZS46 218 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 TMEM144Q7Z5S9 345 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 TTC9CQ8N5M4 171 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 CACNG8Q8WXS5 425 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 SAT2Q96F10 170 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-204ENST00000409727 DUX5Q96PT3 197 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 GGTLC1Q9BX51 225 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 RPRMQ9NS64 109 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 ZNF355PQ9NSJ1 428 aa9.81□□□□□ -0.84
CHMP3-204ENST00000409727 PXMP4Q9Y6I8 212 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 738.9 ms