RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 Q8TCH9 128 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 ZCCHC14Q8WYQ9 949 aaKnown RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 PKIBQ9C010 78 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 NPVFQ9HCQ7 196 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 ELOVL5Q9NYP7 299 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 DSCAMO60469 2012 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 RAB29O14966 203 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 LY6HO94772 140 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 BTF3P20290 206 aaKnown RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 TM4SF20Q53R12 229 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 SLC35E1Q96K37 410 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 RNF2Q99496 336 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 WT1P19544 449 aaPredicted RBP6.86□□□□□ -1.31
SNX13-201ENST00000409076 RND2P52198 227 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 KLF3P57682 345 aaPredicted RBP6.86□□□□□ -1.31
SNX13-201ENST00000409076 TNXAQ16473 311 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 ACTL10Q5JWF8 245 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 RNF138Q8WVD3 245 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 DAZAP1Q96EP5 407 aaKnown RBP6.86□□□□□ -1.31
SNX13-201ENST00000409076 C2orf88Q9BSF0 95 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 NACAE9PAV3 2078 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 IGKV1D-17A0A075B6S4 117 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A10PA6NDY2 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A18PA6NE21 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A16PA6NEW6 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A20PA6NIJ5 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A8PA6NJQ4 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A7PA6NKC0 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A22PA8MWA6 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A12PA8MX19 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A5PA8MXJ8 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A23PA8MXZ1 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 PDE6DO43924 150 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 GCGP01275 180 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A15PP0C7V4 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A13PP0C7W8 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A14PP0C7W9 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FAM90A24PP0C7X0 464 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 GABRA6Q16445 453 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 MORN2Q502X0 79 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 BHLHA15Q7RTS1 189 aaPredicted RBP6.86□□□□□ -1.31
SNX13-201ENST00000409076 OR4S2Q8NH73 311 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 NRN1Q9NPD7 142 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 hADV38S2A0JD32 116 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 FBLL1A6NHQ2 334 aaKnown RBP6.86□□□□□ -1.31
SNX13-201ENST00000409076 ATP6V1FQ16864 119 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 MSMPQ1L6U9 139 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 OR8B2Q96RD0 313 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 TMEM106BQ9NUM4 274 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 SSUH2Q9Y2M2 353 aa6.86□□□□□ -1.31
SNX13-201ENST00000409076 IGHV2OR16-5A0A0B4J2B6 119 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 CNIH1O95406 144 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 RAB7AP51149 207 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 CT45A1Q5HYN5 189 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 SLC35E4Q6ICL7 350 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 SAXO1Q8IYX7 474 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 CT45A3Q8NHU0 189 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 MRPL20Q9BYC9 149 aaKnown RBP6.85□□□□□ -1.31
SNX13-201ENST00000409076 HES4Q9HCC6 221 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 WDR83OSQ9Y284 106 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 PTPRQQ9UMZ3 2332 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 PGPA6NDG6 321 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 PROP1O75360 226 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 APCSP02743 223 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 TRIP6Q15654 476 aaKnown RBP6.85□□□□□ -1.31
SNX13-201ENST00000409076 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
SNX13-201ENST00000409076 OR1L4Q8NGR5 311 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 CORO2AQ92828 525 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 TMEM45BQ96B21 275 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 IGHV1-18A0A0C4DH31 117 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 GFRA3O60609 400 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 RPL19P84098 196 aaKnown RBP6.85□□□□□ -1.31
SNX13-201ENST00000409076 PRNTQ86SH4 94 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 GCSAMQ8N6F7 178 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 NOL4LQ96MY1 436 aaPredicted RBP6.85□□□□□ -1.31
SNX13-201ENST00000409076 TMEM208Q9BTX3 173 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 WASHC3Q9Y3C0 194 aa6.85□□□□□ -1.31
SNX13-201ENST00000409076 CCKARP32238 428 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 SRP14P37108 136 aaKnown RBP6.84□□□□□ -1.31
SNX13-201ENST00000409076 GMPPAQ96IJ6 420 aaPredicted RBP6.84□□□□□ -1.31
SNX13-201ENST00000409076 LINC00470Q9BZP3 86 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 SLC45A2Q9UMX9 530 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 A0A1B0GW64 132 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 CHEK1O14757 476 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 KIR2DL2P43627 348 aaPredicted RBP6.84□□□□□ -1.31
SNX13-201ENST00000409076 IGFL4Q6B9Z1 124 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 TPSG1Q9NRR2 321 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 KCNIP2Q9NS61 270 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 WNK1Q9H4A3 2382 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 IGKV3-7A0A075B6H7 116 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 hDV102S1A0JD36 115 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 CGB1A6NKQ9 187 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 SRRM4A7MD48 611 aaKnown RBP6.84□□□□□ -1.31
SNX13-201ENST00000409076 KLK10O43240 276 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 SAA1P0DJI8 122 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms